Difference between revisions of "20.109(F12): Fall 2012 schedule"
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| Thur Sept 6 | | Thur Sept 6 | ||
| − | | [ | + | | [http://openwetware.org/wiki/Natalie_Kuldell | NK] and [http://web.mit.edu/be/people/engelward.htm BE] |
| | | | ||
| [[20.109(F12):Lab tour | Orientation]] | | [[20.109(F12):Lab tour | Orientation]] | ||
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| 1 | | 1 | ||
| Tues Sept 11 | | Tues Sept 11 | ||
| − | | [ | + | | [http://openwetware.org/wiki/Natalie_Kuldell | NK] |
| − | | [ | + | | [http://openwetware.org/wiki/User:Jennifer_Kay | JK] |
| [[20.109(F12): Mod 1 Day 1 DNA engineering using PCR | DNA engineering using PCR]] | | [[20.109(F12): Mod 1 Day 1 DNA engineering using PCR | DNA engineering using PCR]] | ||
| [[Media:20.109(F12) M1D1 LabNotes.pdf| NK lab notes]], [[Media:F12_M1D1-ANS.pdf | ANS lab notes]] | | [[Media:20.109(F12) M1D1 LabNotes.pdf| NK lab notes]], [[Media:F12_M1D1-ANS.pdf | ANS lab notes]] | ||
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| Thur Sept 13 | | Thur Sept 13 | ||
| [http://web.mit.edu/be/people/engelward.htm BE] | | [http://web.mit.edu/be/people/engelward.htm BE] | ||
| − | | [ | + | | [http://openwetware.org/wiki/User:Jennifer_Kay | JK] |
|[[20.109(F12): Mod 1 Day 2 Clean and cut DNA | Clean and cut DNA]] | |[[20.109(F12): Mod 1 Day 2 Clean and cut DNA | Clean and cut DNA]] | ||
|[[Media:20.109(F12) M1D2 NKlabnotes.pdf| NK lab notes]], [[Media:F12_M1D2-ANS.pdf | ANS lab notes]] | |[[Media:20.109(F12) M1D2 NKlabnotes.pdf| NK lab notes]], [[Media:F12_M1D2-ANS.pdf | ANS lab notes]] | ||
| Line 40: | Line 40: | ||
| Tues Sept 18 | | Tues Sept 18 | ||
| [http://web.mit.edu/be/people/engelward.htm BE] | | [http://web.mit.edu/be/people/engelward.htm BE] | ||
| − | | [ | + | | [http://openwetware.org/wiki/User:Jennifer_Kay | JK] |
| [[20.109(F12): Mod 1 Day 3 Agarose gel electrophoresis| Agarose gel electrophoresis]] | | [[20.109(F12): Mod 1 Day 3 Agarose gel electrophoresis| Agarose gel electrophoresis]] | ||
| Writing Faculty visit lab ~2:30PM for intro to figures and legends<br> Yellow sheets from your [[20.109(F12):Guidelines for maintaining your lab notebook| lab notebooks]] will be turned in for feedback after your M1D3 day in lab.<br> [[Media:20.109(F12) M1D3 labtalk.pdf| NK lab notes]], [[Media:F12_M1D3-ANS.pdf | ANS lab notes]] | | Writing Faculty visit lab ~2:30PM for intro to figures and legends<br> Yellow sheets from your [[20.109(F12):Guidelines for maintaining your lab notebook| lab notebooks]] will be turned in for feedback after your M1D3 day in lab.<br> [[Media:20.109(F12) M1D3 labtalk.pdf| NK lab notes]], [[Media:F12_M1D3-ANS.pdf | ANS lab notes]] | ||
| Line 57: | Line 57: | ||
| Tues Sept 25 | | Tues Sept 25 | ||
| [http://web.mit.edu/be/people/engelward.htm BE] | | [http://web.mit.edu/be/people/engelward.htm BE] | ||
| − | | [ | + | | [http://openwetware.org/wiki/User:Jennifer_Kay | JK] |
| [[20.109(F12): Mod 1 Day 4 DNA ligations and bacterial transformations| DNA ligation and bacterial transformation]] | | [[20.109(F12): Mod 1 Day 4 DNA ligations and bacterial transformations| DNA ligation and bacterial transformation]] | ||
| Martha from EHS will visit lab ~3PM for intro to TC safety<br>[[Media:20.109(F12) M1D4 labtalk.pdf| NK lab notes]], [[Media:F12_M1D4-ANS.pdf | ANS lab notes]] | | Martha from EHS will visit lab ~3PM for intro to TC safety<br>[[Media:20.109(F12) M1D4 labtalk.pdf| NK lab notes]], [[Media:F12_M1D4-ANS.pdf | ANS lab notes]] | ||
| Line 66: | Line 66: | ||
| Thur Sept 27 | | Thur Sept 27 | ||
| [http://web.mit.edu/be/people/engelward.htm BE] | | [http://web.mit.edu/be/people/engelward.htm BE] | ||
| − | | [ | + | | [http://openwetware.org/wiki/User:Jennifer_Kay | JK] |
| [[20.109(F12): Mod 1 Day 5 Examine candidate clones & tissue culture| Examine candidate clones and tissue culture]] | | [[20.109(F12): Mod 1 Day 5 Examine candidate clones & tissue culture| Examine candidate clones and tissue culture]] | ||
| [[Media:20.109(F12) M1D5 labtalk.pdf| NK lab notes]], [[Media:F12_M1D5-ANS.pdf | ANS lab notes]]<br>Diagnostic gel will be posted for your analysis<br> | | [[Media:20.109(F12) M1D5 labtalk.pdf| NK lab notes]], [[Media:F12_M1D5-ANS.pdf | ANS lab notes]]<br>Diagnostic gel will be posted for your analysis<br> | ||
| Line 74: | Line 74: | ||
| Tues Oct 2 | | Tues Oct 2 | ||
| [http://web.mit.edu/be/people/engelward.htm BE] | | [http://web.mit.edu/be/people/engelward.htm BE] | ||
| − | | [ | + | | [http://openwetware.org/wiki/User:Jennifer_Kay | JK] |
| [[20.109(F12): Mod 1 Day 6 Lipofection & lab practical| Lipofection & lab certification]] | | [[20.109(F12): Mod 1 Day 6 Lipofection & lab practical| Lipofection & lab certification]] | ||
| If you've chosen the oral communication concentration for this module, your [[20.109(F12): Online cloning lab and defense|virtual lab]] is due 10.2.12! Oral defense for Jenny during your lab period.<br> [[Media:20.109(F12) M1D6 labtalk NK.pdf| NK lab notes]], [[Media:F12_M1D6-ANS.pdf | ANS lab notes]] | | If you've chosen the oral communication concentration for this module, your [[20.109(F12): Online cloning lab and defense|virtual lab]] is due 10.2.12! Oral defense for Jenny during your lab period.<br> [[Media:20.109(F12) M1D6 labtalk NK.pdf| NK lab notes]], [[Media:F12_M1D6-ANS.pdf | ANS lab notes]] | ||
| Line 82: | Line 82: | ||
| Thurs Oct 4 | | Thurs Oct 4 | ||
| [http://web.mit.edu/be/people/engelward.htm BE] | | [http://web.mit.edu/be/people/engelward.htm BE] | ||
| − | | [ | + | | [http://openwetware.org/wiki/User:Jennifer_Kay | JK] |
| [[20.109(F12): Mod 1 Day 7 FACS analysis| FACS analysis]] | | [[20.109(F12): Mod 1 Day 7 FACS analysis| FACS analysis]] | ||
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| 1 | | 1 | ||
| Thurs Oct 11 | | Thurs Oct 11 | ||
| − | | [ | + | | [http://openwetware.org/wiki/Natalie_Kuldell | NK] |
| EM | | EM | ||
| [[20.109(F12): Mod 2 Day 1 Testing an engineered biological system| Testing an engineered biological system]] | | [[20.109(F12): Mod 2 Day 1 Testing an engineered biological system| Testing an engineered biological system]] | ||
| Line 106: | Line 106: | ||
| 2 | | 2 | ||
| Tues Oct 16 | | Tues Oct 16 | ||
| − | | [ | + | | [http://openwetware.org/wiki/Natalie_Kuldell | NK] |
| EM | | EM | ||
| [[20.109(F12): Mod 2 Day 2 Measuring system performance | Measuring System Performance]] | | [[20.109(F12): Mod 2 Day 2 Measuring system performance | Measuring System Performance]] | ||
| Line 114: | Line 114: | ||
| 3 | | 3 | ||
| Thurs Oct 18 | | Thurs Oct 18 | ||
| − | | [ | + | | [http://openwetware.org/wiki/Natalie_Kuldell | NK] |
| EM | | EM | ||
| [[20.109(F12): Mod 2 Day 3 Tools for system engineering | Tools for System Engineering]] | | [[20.109(F12): Mod 2 Day 3 Tools for system engineering | Tools for System Engineering]] | ||
| Line 130: | Line 130: | ||
| 5 | | 5 | ||
| Thurs Oct 25 | | Thurs Oct 25 | ||
| − | | [ | + | | [http://openwetware.org/wiki/Natalie_Kuldell | NK] |
| EM | | EM | ||
| [[20.109(F12): Mod 2 Day 5 Assessing re-tuned system | Assessing re-tuned system]] | | [[20.109(F12): Mod 2 Day 5 Assessing re-tuned system | Assessing re-tuned system]] | ||
| Line 138: | Line 138: | ||
| 6 | | 6 | ||
| Tues Oct 30 | | Tues Oct 30 | ||
| − | | [ | + | | [http://openwetware.org/wiki/Natalie_Kuldell | NK] |
| EM | | EM | ||
| [[20.109(F12): Mod 2 Day 6 Readouts of DNA, Protein | Readout: DNA]] | | [[20.109(F12): Mod 2 Day 6 Readouts of DNA, Protein | Readout: DNA]] | ||
| Line 146: | Line 146: | ||
| 7 | | 7 | ||
| Thurs Nov 1 | | Thurs Nov 1 | ||
| − | | [ | + | | [http://openwetware.org/wiki/Natalie_Kuldell | NK] |
| EM | | EM | ||
| [[20.109(F12): Mod 2 Day 7 Readout of Protein | Readout: Protein]] | | [[20.109(F12): Mod 2 Day 7 Readout of Protein | Readout: Protein]] | ||
| Line 171: | Line 171: | ||
| 1 | | 1 | ||
| Tues Nov 13 | | Tues Nov 13 | ||
| − | | [ | + | | [http://openwetware.org/wiki/User:Abelcher | AB] |
| JO | | JO | ||
| [[20.109(F12): Mod 3 Day 1 Growth of phage materials| Growth of phage materials]] | | [[20.109(F12): Mod 3 Day 1 Growth of phage materials| Growth of phage materials]] | ||
| Line 179: | Line 179: | ||
| 2 | | 2 | ||
| Thurs Nov 15 | | Thurs Nov 15 | ||
| − | | [ | + | | [http://openwetware.org/wiki/User:Abelcher | AB] |
| JO | | JO | ||
| [[20.109(F12): Mod 3 Day 2 Phage nanowires| Phage nanowires]] | | [[20.109(F12): Mod 3 Day 2 Phage nanowires| Phage nanowires]] | ||
| Line 196: | Line 196: | ||
| 3 | | 3 | ||
| Tues Nov 27 | | Tues Nov 27 | ||
| − | | [ | + | | [http://openwetware.org/wiki/User:Abelcher | AB] |
| JO | | JO | ||
| [[20.109(F12): Mod 3 Day 3 TEM| TEM]] | | [[20.109(F12): Mod 3 Day 3 TEM| TEM]] | ||
| − | | [[20.109(F12): Written research pre-proposal| Pre-proposal]] should be printed and brought to next lecture (11.29.12)<br>[[Media:M3D3_SKA_LabLecture.pdf|SKH lab notes]] | + | | [[20.109(F12): Written research pre-proposal| Pre-proposal]] should be printed and brought to next lecture (11.29.12)<br>[[Media:M3D3_SKA_LabLecture.pdf|SKH lab notes]],[[Media:F12_M3D3-ANS.pdf | ANS lab notes]] |
|-- | |-- | ||
| 3 | | 3 | ||
| 4 | | 4 | ||
| Thurs Nov 29 | | Thurs Nov 29 | ||
| − | | [ | + | | [http://openwetware.org/wiki/User:Abelcher | AB] |
| JO | | JO | ||
| [[20.109(F12): Mod 3 Day 4 Solar cell assembly| Solar cell assembly]] | | [[20.109(F12): Mod 3 Day 4 Solar cell assembly| Solar cell assembly]] | ||
| − | | Atissa will visit lab @4PM to offer tips for giving talks with a partner<br>Yellow sheets from your [[20.109(F12):Guidelines for maintaining your lab notebook| lab notebooks]] will be turned in for feedback after your M3D4 day in lab.<br> | + | | Atissa will visit lab @4PM to offer tips for giving talks with a partner<br>Yellow sheets from your [[20.109(F12):Guidelines for maintaining your lab notebook| lab notebooks]] will be turned in for feedback after your M3D4 day in lab.<br>[[Media:M3D4_Prelab_SKH_JO.pdf|lab notes -- TR]], [[Media:F12_M3D4-ANS.pdf | ANS lab notes]] |
|-- | |-- | ||
| 3 | | 3 | ||
| 5 | | 5 | ||
| Tues Dec 4 | | Tues Dec 4 | ||
| − | | [ | + | | [http://openwetware.org/wiki/User:Abelcher | AB] |
| JO | | JO | ||
| [[20.109(F12): Mod 3 Day 5 Solar cell testing| Solar cell testing]] | | [[20.109(F12): Mod 3 Day 5 Solar cell testing| Solar cell testing]] | ||
| + | | [[Media:M3D5_Prelab.pdf|SKH lab notes]], [[Media:F12_M3D5-ANS.pdf | ANS lab notes]] | ||
| | | | ||
|-- | |-- | ||
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| 6 | | 6 | ||
| Thurs Dec 6 | | Thurs Dec 6 | ||
| − | | [ | + | | [http://openwetware.org/wiki/User:Abelcher | AB] |
| JO | | JO | ||
| [[20.109(F12): Mod 3 Day 6 Oral presentations| Research proposal presentations]] | | [[20.109(F12): Mod 3 Day 6 Oral presentations| Research proposal presentations]] | ||
Latest revision as of 13:41, 29 July 2015
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| MODULE | DAY | DATE | LECTURER | TA | LAB | note | |
| Thur Sept 6 | NK] and BE | Orientation | Orientation handout NK Orientation handout BE ANS lab notes | ||||
| 1 | 1 | Tues Sept 11 | NK] | JK] | DNA engineering using PCR | NK lab notes, ANS lab notes | |
| 1 | 2 | Thur Sept 13 | BE | JK] | Clean and cut DNA | NK lab notes, ANS lab notes | |
| 1 | 3 | Tues Sept 18 | BE | JK] | Agarose gel electrophoresis | Writing Faculty visit lab ~2:30PM for intro to figures and legends Yellow sheets from your lab notebooks will be turned in for feedback after your M1D3 day in lab. NK lab notes, ANS lab notes | |
| MIT Break Friday Sept 21 | No lab or lecture Thursday or Friday | ||||||
|---|---|---|---|---|---|---|---|
| 1 | 4 | Tues Sept 25 | BE | JK] | DNA ligation and bacterial transformation | Martha from EHS will visit lab ~3PM for intro to TC safety NK lab notes, ANS lab notes | |
| 1 | 5 | Thur Sept 27 | BE | JK] | Examine candidate clones and tissue culture | NK lab notes, ANS lab notes Diagnostic gel will be posted for your analysis | |
| 1 | 6 | Tues Oct 2 | BE | JK] | Lipofection & lab certification | If you've chosen the oral communication concentration for this module, your virtual lab is due 10.2.12! Oral defense for Jenny during your lab period. NK lab notes, ANS lab notes | |
| 1 | 7 | Thurs Oct 4 | BE | JK] | FACS analysis | ||
| Columbus Day Break Monday, Tues Oct 8, 9 | No lab Tues or Wed, but your powerpoint summary or FACS data analysis slides is due by 11AM 10.11.12 | ||||||
| 2 | 1 | Thurs Oct 11 | NK] | EM | Testing an engineered biological system | You must choose a Journal Club article to work on during this module. Please sign up for your article on the wiki before your M2D2 lab. NK lecture notes, SKH lab notes, ANS lab notes | |
| 2 | 2 | Tues Oct 16 | NK] | EM | Measuring System Performance | Atissa will visit lab @4PM to offer tips for giving journal club talks Everyone's Journal Club slides are due before midnight on the day of your M2D3 lab. NK lecture handout SKH lab notes, ANS lab notes | |
| 2 | 3 | Thurs Oct 18 | NK] | EM | Tools for System Engineering | Yellow sheets from your lab notebooks will be turned in for feedback after your M2D3 day in lab. NK lecture handout SKH lab notes, ANS lab notes | |
| 2 | 4 | Tues Oct 23 | Journal Club | EM | Journal Club I | No Lecture Tuesday Oct 23. Start the day in lab to choose Cph8 mutants. SKH lab notes, ANS lab notes | |
| 2 | 5 | Thurs Oct 25 | NK] | EM | Assessing re-tuned system | Writing faculty visit lab ~4PM for IMRD training reference info NK lecture handout , ANS lab notes | |
| 2 | 6 | Tues Oct 30 | NK] | EM | Readout: DNA | NK lecture handout SKH lab notes, ANS lab notes | |
| 2 | 7 | Thurs Nov 1 | NK] | EM | Readout: Protein | NK lecture handout SKH lab notes , ANS lab notes | |
| 2 | 8 | Tues Nov 6 | Journal Club | EM | Journal Club II | Group meeting in lecture, including short presentation from Amar Ghodasara, grad student/Voigt lab, on alternative re-tuning approaches | |
| Veteran's Day Break Monday Nov 12 | No lab Thurs or Fri, but your Mod 2 research article or the results and discussion is due by 11:12AM on 11.12.12 | ||||||
| 3 | 1 | Tues Nov 13 | AB] | JO | Growth of phage materials | NK lab notes, ANS lab notes | |
| 3 | 2 | Thurs Nov 15 | AB] | JO | Phage nanowires | NK lab notes, ANS lab notes | |
| Thanksgiving Break Nov 22, 23 | Lecture: yes, on Tuesday Nov 20th Lab: none all week! | ||||||
| 3 | 3 | Tues Nov 27 | AB] | JO | TEM | Pre-proposal should be printed and brought to next lecture (11.29.12) SKH lab notes, ANS lab notes | |
| 3 | 4 | Thurs Nov 29 | AB] | JO | Solar cell assembly | Atissa will visit lab @4PM to offer tips for giving talks with a partner Yellow sheets from your lab notebooks will be turned in for feedback after your M3D4 day in lab. lab notes -- TR, ANS lab notes | |
| 3 | 5 | Tues Dec 4 | AB] | JO | Solar cell testing | SKH lab notes, ANS lab notes | |
| 3 | 6 | Thurs Dec 6 | AB] | JO | Research proposal presentations | We'll start this day in lab, 56-322, to finish off the BioMaterials module | |
| Tues Dec 11 | end of term celebration... | Lecture for class evaluations then lunch from 11:30-1 PM, 16-220, no lab | |||||
