Difference between revisions of "20.309 Main Page"
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| Week 15: Dec. 11-17 | | Week 15: Dec. 11-17 | ||
| − | | Attend a Measuring Biological Forces demo | + | | Attend a Measuring Biological Forces demo and eat cupcakes! |
| − | | <font color=#04B45F> Tuesday, Dec. 13: Cupcakes! </font color> | + | | <font color=#04B45F> Tuesday, Dec. 13: Cupcakes at 12pm (16-352)! |
| − | | | + | Tuesday, Dec. 13 or Wednesday, Dec. 14: Attend a demo</font color> |
| + | | Sign up for an Optical Tweezers/AFM demo: | ||
| + | Tuesday, Dec. 13: 1:30-3pm, 3:30-5pm, 7-8:30pm | ||
| + | Wednesday, Dec. 14: 10:30am-12pm, 1-2:30pm, 3-4:30pm http://doodle.com/poll/ihutnq5xurz78e5c | ||
| Limits of detection mini-lab | | Limits of detection mini-lab | ||
| + | * [[Optical trap]] | ||
* [[Lab Manual: Limits of Detection]] | * [[Lab Manual: Limits of Detection]] | ||
* [[Lab Manual: Atomic Force Microscopy (AFM)]] | * [[Lab Manual: Atomic Force Microscopy (AFM)]] | ||
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20.309 This week and next in the 20.309 lab
| Week | Summary | Assignments due | Lab Manual | Resources |
| Week 15: Dec. 11-17 | Attend a Measuring Biological Forces demo and eat cupcakes! | Tuesday, Dec. 13: Cupcakes at 12pm (16-352)!
Tuesday, Dec. 13 or Wednesday, Dec. 14: Attend a demo |
Sign up for an Optical Tweezers/AFM demo:
Tuesday, Dec. 13: 1:30-3pm, 3:30-5pm, 7-8:30pm Wednesday, Dec. 14: 10:30am-12pm, 1-2:30pm, 3-4:30pm http://doodle.com/poll/ihutnq5xurz78e5c |
Limits of detection mini-lab |
Contents
20.309 course information
Reserve a lab station here: Bioinstrumentation Lab reservation system
Optics bootcamp
Lab manual
Background reading
- Geometrical optics and ray tracing
- Optical detectors, noise, and the limit of detection
- Manta G032 camera measurements
Optical microscopy lab
Code examples and simulations
- Converting Gaussian fit to Rayleigh resolution
- MATLAB: Estimating resolution from a PSF slide image
- Matlab: Scalebars
- Calculating MSD and Diffusion Coefficients
Background reading
- Geometrical optics and ray tracing
- Physical optics and resolution
- Optical aberrations
- Aperture and field stops
- Optical detectors, noise, and the limit of detection
- Manta G032 camera measurements
- Understanding log plots
Electronics bootcamp
Lab manual
Background reading
- Electronics primer
- Khan Academy Material, esp. "Ideal Circuit Elements" and "Voltage Divider"
- Real electronics
- Impedance analysis
- Transfer functions and Bode plots
- Complex number review
- Input and output impedance
DNA melting lab
Lab manuals
- Lab Manual:Measuring DNA Melting Curves
- DNA Melting Part 1: Measuring Temperature and Fluorescence
- DNA Melting Report Requirements for Part 1
- DNA Melting: Model function and parameter estimation by nonlinear regression
- DNA Melting: Simulating DNA Melting - Intermediate Topics
- DNA melting: Identifying the unknown sample
- DNA Melting Part 2: Lock-in Amplifier and Temperature Control
- DNA Melting Report Requirements for Part 2
Code examples and simulations
- DNA Melting: Simulating DNA Melting - Basics
- DNA Melting: Simulating DNA Melting - Intermediate Topics
- DNA Melting: Model function and parameter estimation by nonlinear regression
Reference materials
Background reading
Limits of detection mini-lab
- Lab Manual: Limits of Detection
- Lab Manual: Atomic Force Microscopy (AFM)
- Limits of Detection: Data Sessions
