Difference between revisions of "20.309 Main Page"
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|style="width: 35%;"|'''Resources''' | |style="width: 35%;"|'''Resources''' | ||
|-- | |-- | ||
− | | Week | + | | Week 7: Oct. 16 - 22 |
− | | | + | | Continue Microscopy 3 |
− | | | + | | |
| [[Optical Microscopy Part 3: Resolution, Stability, and Particle Tracking|Microscopy 3]] | | [[Optical Microscopy Part 3: Resolution, Stability, and Particle Tracking|Microscopy 3]] | ||
| Overview | | Overview | ||
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* [[MATLAB: Estimating resolution from a PSF slide image]] | * [[MATLAB: Estimating resolution from a PSF slide image]] | ||
* [[Matlab: Scalebars]] | * [[Matlab: Scalebars]] | ||
+ | * [[Calculating MSD and Diffusion Coefficients]] | ||
Background reading | Background reading | ||
* [[Geometrical optics and ray tracing]] | * [[Geometrical optics and ray tracing]] | ||
Line 39: | Line 40: | ||
* [[Manta G032 camera measurements]] | * [[Manta G032 camera measurements]] | ||
|-- | |-- | ||
− | | Week | + | | rowspan="2"| Week 8: Oct. 23 - 29 |
− | | | + | | rowspan="2"| Finish Microscopy 3, study for Exam 1, and if you're super keen, get started on the Electronics bootcamp! |
− | | | + | | rowspan="2"| <font color=#04B45F> Tuesday Oct. 25: Microscopy 3 |
+ | Thursday Oct.27: Exam 1 (at 7:30pm in 4-163)</font color> | ||
| [[Optical Microscopy Part 3: Resolution, Stability, and Particle Tracking|Microscopy 3]] | | [[Optical Microscopy Part 3: Resolution, Stability, and Particle Tracking|Microscopy 3]] | ||
| | | | ||
− | + | |- | |
+ | | [[Electronics Mini-Lab|Electronics bootcamp]] | ||
+ | | | ||
+ | * [[Electronics primer]] | ||
+ | * [https://www.khanacademy.org/science/electrical-engineering/ee-circuit-analysis-topic Khan Academy Material, esp. "Ideal Circuit Elements" and "Voltage Divider"] | ||
+ | * [[Real electronics]] | ||
+ | * [[Impedance Analysis|Impedance analysis]] | ||
+ | * [[Bode plots|Transfer functions and Bode plots]] | ||
+ | * [[Complex Number Review|Complex number review]] | ||
+ | * [[Input and output impedance]] | ||
|} | |} | ||
</div> | </div> |
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20.309 This week and next in the 20.309 lab
Week | Summary | Assignments due | Lab Manual | Resources |
Week 7: Oct. 16 - 22 | Continue Microscopy 3 | Microscopy 3 | Overview
Code examples and simulations
Background reading | |
Week 8: Oct. 23 - 29 | Finish Microscopy 3, study for Exam 1, and if you're super keen, get started on the Electronics bootcamp! | Tuesday Oct. 25: Microscopy 3
Thursday Oct.27: Exam 1 (at 7:30pm in 4-163) |
Microscopy 3 | |
Electronics bootcamp |
Contents
20.309 course information
Reserve a lab station here: Bioinstrumentation Lab reservation system
Optics bootcamp
Lab manual
Background reading
- Geometrical optics and ray tracing
- Optical detectors, noise, and the limit of detection
- Manta G032 camera measurements
Optical microscopy lab
Code examples and simulations
- Converting Gaussian fit to Rayleigh resolution
- MATLAB: Estimating resolution from a PSF slide image
- Matlab: Scalebars
- Calculating MSD and Diffusion Coefficients
Background reading
- Geometrical optics and ray tracing
- Physical optics and resolution
- Optical aberrations
- Aperture and field stops
- Optical detectors, noise, and the limit of detection
- Manta G032 camera measurements
- Understanding log plots
Electronics bootcamp
Lab manual
Background reading
- Electronics primer
- Khan Academy Material, esp. "Ideal Circuit Elements" and "Voltage Divider"
- Real electronics
- Impedance analysis
- Transfer functions and Bode plots
- Complex number review
- Input and output impedance
DNA melting lab
Lab manuals
- Lab Manual:Measuring DNA Melting Curves
- DNA Melting Part 1: Measuring Temperature and Fluorescence
- DNA Melting Report Requirements for Part 1
- DNA Melting: Model function and parameter estimation by nonlinear regression
- DNA Melting: Simulating DNA Melting - Intermediate Topics
- DNA melting: Identifying the unknown sample
- DNA Melting Part 2: Lock-in Amplifier and Temperature Control
- DNA Melting Report Requirements for Part 2
Code examples and simulations
- DNA Melting: Simulating DNA Melting - Basics
- DNA Melting: Simulating DNA Melting - Intermediate Topics
- DNA Melting: Model function and parameter estimation by nonlinear regression
Reference materials
Background reading
Limits of detection mini-lab
- Lab Manual: Limits of Detection
- Lab Manual: Atomic Force Microscopy (AFM)
- Limits of Detection: Data Sessions