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Matlab:Image Processing for Fluorescent MicroscopyMatlab:Matlab Fundamentals
Matlab:Simulating DNA Melting
Matlab:Simulating DNA melting
Matlab: ScalebarsMatlab: Simulating Brownian motion
Measuring biological forces mini-labMeasuring optical magnificationMethods
Microrheology Measurements via Particle Tracking
Microscope Objective LensesMicroscopy report general guidelines
Microscopy report outlineMore info on BJC2100 AttemptNonlinear regression
Objective
Optical Microscopy: Brownian motion and microscope stability
Optical Microscopy: Brownian motion and microscopy stability
Optical Microscopy: Construction of a microscope
Optical Microscopy: Fluorescence Microscopy
Optical Microscopy: Part 1 Report Outline
Optical Microscopy: Part 2 Report OutlineOptical Microscopy: Part 3 Report OutlineOptical Microscopy: Part 4 Report Outline
Optical Microscopy Data Sheets
Optical Microscopy Part 1: Bright Field Microscopy
Optical Microscopy Part 1: Brightfield Microscopy
Optical Microscopy Part 1b: Geometrical Optics and Ray Tracing
Optical Microscopy Part 1b: Ray Tracing
Optical Microscopy Part 1c: Physical Optics and Limits of Detection
Optical Microscopy Part 1d: Noise Sources in Light Detection
Optical Microscopy Part 2: Fluorescence Microscopy
Optical Microscopy Part 2b: High Resolution Microscopy Techniques
Optical Microscopy Part 3: Particle Tracking
Optical Microscopy Part 3: Particle Tracking Applications
Optical Microscopy Part 3: Resolution, Stability, and Particle Tracking
Optical Microscopy Part 3: Resolution and Stability
Optical Microscopy Part 3a: Particle Tracking
Optical Microscopy Part 3a: Particle Tracking in Glycerin Samples
Optical Microscopy Part 3b: Microrheology Measurements in Fibroblast Cells
Optical Microscopy Part 3b: Microrheology Measurements in Live Fibroblast Cells
Optical Microscopy Part 3c: Fluorescence Imaging of Actin Cytoskeleton
Optical Microscopy Part 3c: Protocols for cell culture, cell fixing and cell imaging
Optical Microscopy Part 4: Microrheology Measurements in Fibroblast Cells
Optical Microscopy Part 4: Particle Tracking
Optical Microscopy Week 1: Bright Field Microscopy
Optical Microscopy Week 1: Brightfield Microscopy
Optical Microscopy Week 1: Build a brightfield microscope
Optical Microscopy Week 2: Fluorescence Microscopy
Optical Microscopy Week 3: Experiments
Optical Microscopy Week 3: Particle Tracking
Optical Microscopy Week 4: Microrheology Measurements in Fibroblast Cells
Optical Trap CodeOptical Trap Graphs
Optical aberrationsOptical detectors, noise, and the limit of detectionOptical microscopy lab wiki pages
Optical resolutionOptical trapOptics Bootcamp
PapersPapers to readPart 3 Combined Report Outline
Particle Tracking ExercisePhotobleaching ModelPhysical optics and resolution
Power spectral densityProbability and statisticsProblem Set 1
Problem Set 2Problem Set 2 Fall 2010Procedure: Diffusion in biological gels
Procedure: Particle trackingProcedure: Peptide-DNA Tethering AssayProject ideas
ProtocolsProtocols for cell culture
Protocols for cell culture, fixing and imaging
Protocols for making microscopy samplesPython:DNA melting data analysisPython:Simulating DNA Melting
QRT-PCRQRT-PCR:Get StartedQRT-PCR:Heated Lid
QRT-PCR:LabView-versionsReal electronicsRecording, displaying and saving images in MATLAB
Reference ListRelay Lens Example
Resource List:Electronics
Resource List:Suppliers
Resource list:DNA melting and PCR
Resource list:Electronics
Resource list:Magnetic Resonance Imaging
Resource list:Optical trapping
Resource list:Optics
Resource list:Suppliers
Resource list: DNA melting and PCRResource list: Electronics
Resource list: Fiber opticsResource list: Image EnhancementResource list: Image processing
Resource list: Magnetic Resonance ImagingResource list: MatlabResource list: Microscopy
Resource list: Optical trappingResource list: OpticsResource list: Particle tracking
Resource list: SuppliersResultsReview of probability concepts
SToNCalculator.mSandboxSave the curve to a USB memory stick
Shot noise and centroid findingSimulating diffusing microspheres in MATLAB
Spring09/Todo
Spring09:Todo listSpring 11:CellPrinterSpring 11:Chemotaxis Assay
Spring 11:Confocal MicroscopeSpring 11:Directed EvolutionSpring 11:Directed Evolution/KAF95
Spring 11:Directed Evolution/Perfusion ChambersSpring 11:Directed Evolution/Week of 3-14-2011 StatusSpring 11:Directed Evolution/Week of 3-21-2011 Status
Spring 11:Directed Evolution/Week of 3-28-2011 StatusSpring 11:Directed Evolution/Week of 4-04-2011 StatusSpring 11:Directed Evolution/Week of 4-11-2011 Status
Spring 11:Directed Evolution/Week of 4-18-2011 StatusSpring 11:Directed Evolution/Week of 4-25-2011 StatusSpring 11:Directed Evolution/Week of 5-02-2011 Status
Spring 11:Directed Evolution/Week of 5-09-2011 StatusSpring 11:QRT-PCRSpring 11:QRT-PCR: Progress Notes
Spring 11:QRT-PCR weekly reportsSpring 11:SMRSpring 11:eSTORM
Spring 11 ChemotaxisAssayWeeklyReportsSpring 11 Chemotaxis Assay Weekly ReportsSpring 2011:3D PSF lab
Spring 2011:3D PSF lab:KristinSpring 2011:CellFinderSpring 2011:Optical Trapping Lab
Spring 2012:LFMSpring 2012:LFM DocumentationSpring 2012:LFM Extra
Spring 2012:LFM LiteratureSpring 2012:LFM ProposalSpring 2012:LFM Report
Spring 2012:Leanna MorinishiSpring 2012:Leanna Morinishi JournalSpring 2012:Leanna Morinishi LFM
Spring 2012:Leanna Morinishi Lab 1Spring 2012:Leanna Morinishi Lab 2Spring 2012:Leanna Morinishi Lit Search
Spring 2012:PSF labSpring 2012:SnotSpring 2012:Vincent Lee Journal
Spring 2012:Vincent Lee Lab 1Spring 2012:Vincent Lee Lab 2Spring 2012: Ajoke Jumoke Williams
Spring 2012: Jonathan GootenbergSpring 2012: Jonathan Gootenberg FinProjectSpring 2012: Jonathan Gootenberg Journal
Spring 2012: Jonathan Gootenberg Lab 2Spring 2012: Jonathan Gootenberg STORMSpring 2012: Real Time qPCR
Spring 2012: Vincent LeeSpring 2012: Williams Key Factors TableSpring 2012 Bioinstrumentation Project Lab
Spring 2012 Bioinstrumentation Project Lab.Spring 2020 Assignment 10Spring 2020 Assignment 6
Spring 2020 Assignment 7Spring 2020 Assignment 8Spring 2020 Assignment 9
Spring 2020 assignment 10Status Report Interrogatories (Spring 2012)Super resolution microscopy
TableTop MRITechnical WritingTemporary Optics Bootcamp
TheoryThermal Quenching ModelThorLabs OTKB optical trapping kit
Todo ListTroubleshootingTwo-color Yeast Protocols
Understanding log plotsUnderstanding the lock-in amplifierUsing CRISPRi to increase ethanol yield in E. coli MG1655
Using nonlinear regression to create a camera specification sheetUsing tfest to find a system modelWeekly Progress Reports
Weekly UpdatesWikibodeplots.mWilliams: Optical Trapping Lab 1
Williams: PSF and Deconvolution Lab 2
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