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| − | + | Bioinstrumentation scholars: you are welcome to edit and improve this course wiki. Correct, helpful, exquisitely-expressed changes will increase your class participation grade. Alterations not meeting those critera may have the opposite effect. | |
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| − | + | If you would like to contribute to this site, please [[Special:RequestAccount|request an account]]. | |
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| + | ==20.309 course information== | ||
| + | |||
| + | * [[20.309:Course Information]] | ||
| + | * [[20.309:Lab Report Guidelines]] | ||
| + | * [[20.309:Safety]] | ||
| + | |||
| + | Reserve a lab station here: [http://measurebiology.org/reservations/Web/schedule.php Bioinstrumentation Lab reservation system] | ||
| + | |||
| + | {{:Optical microscopy lab wiki pages}} | ||
| + | |||
| + | ==Electronics mini-lab== | ||
| + | * [[Electronics Mini-Lab]] | ||
| + | |||
| + | ===Background reading=== | ||
| + | * [[Electronics primer]] | ||
| + | * [[Real electronics]] | ||
| + | |||
| + | {{:DNA melting lab wiki pages}} | ||
| + | |||
| + | ==Limits of detection mini-lab== | ||
| + | * [[Lab Manual: Limits of Detection]] | ||
| + | * [[Lab Manual: Atomic Force Microscopy (AFM)]] | ||
| + | * [[Limits of Detection: Data Sessions]] | ||
| + | |||
| + | ==MRI mini-lab== | ||
| + | * [https://gate.nmr.mgh.harvard.edu/wiki/Tabletop_MRI/index.php/Main_Page MGH tabletop MRI] | ||
| + | (Kept for historical reasons.) | ||
Revision as of 16:17, 15 June 2015
Bioinstrumentation scholars: you are welcome to edit and improve this course wiki. Correct, helpful, exquisitely-expressed changes will increase your class participation grade. Alterations not meeting those critera may have the opposite effect.
If you would like to contribute to this site, please request an account.
20.309 course information
Reserve a lab station here: Bioinstrumentation Lab reservation system
Optical microscopy lab
Code examples and simulations
- Converting Gaussian fit to Rayleigh resolution
- MATLAB: Estimating resolution from a PSF slide image
- Matlab: Scalebars
- Calculating MSD and Diffusion Coefficients
Background reading
- Geometrical optics and ray tracing
- Physical optics and resolution
- Optical aberrations
- Aperture and field stops
- Optical detectors, noise, and the limit of detection
- Manta G032 camera measurements
- Understanding log plots
Electronics mini-lab
Background reading
DNA melting lab
Lab manuals
- Lab Manual:Measuring DNA Melting Curves
- DNA Melting Part 1: Measuring Temperature and Fluorescence
- DNA Melting Report Requirements for Part 1
- DNA Melting: Model function and parameter estimation by nonlinear regression
- DNA Melting: Simulating DNA Melting - Intermediate Topics
- DNA melting: Identifying the unknown sample
- DNA Melting Part 2: Lock-in Amplifier and Temperature Control
- DNA Melting Report Requirements for Part 2
Code examples and simulations
- DNA Melting: Simulating DNA Melting - Basics
- DNA Melting: Simulating DNA Melting - Intermediate Topics
- DNA Melting: Model function and parameter estimation by nonlinear regression
Reference materials
Background reading
Limits of detection mini-lab
- Lab Manual: Limits of Detection
- Lab Manual: Atomic Force Microscopy (AFM)
- Limits of Detection: Data Sessions
