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* [[Lab Manual: Limits of Detection]] | * [[Lab Manual: Limits of Detection]] | ||
* [[Lab Manual: Atomic Force Microscopy (AFM)]] | * [[Lab Manual: Atomic Force Microscopy (AFM)]] | ||
Revision as of 13:12, 2 July 2014
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20.309 course information
Reserve a lab station here: Bioinstrumentation Lab reservation system
20.345 course information
Optical microscopy lab
Code examples and simulations
- Converting Gaussian fit to Rayleigh resolution
- MATLAB: Estimating resolution from a PSF slide image
- Matlab: Scalebars
- Calculating MSD and Diffusion Coefficients
Background reading
- Geometrical optics and ray tracing
- Physical optics and resolution
- Optical aberrations
- Aperture and field stops
- Optical detectors, noise, and the limit of detection
- Manta G032 camera measurements
- Understanding log plots
Electronics mini-lab
Background reading
DNA melting lab
Lab manuals
- Lab Manual:Measuring DNA Melting Curves
- DNA Melting Part 1: Measuring Temperature and Fluorescence
- DNA Melting Report Requirements for Part 1
- DNA Melting: Model function and parameter estimation by nonlinear regression
- DNA Melting: Simulating DNA Melting - Intermediate Topics
- DNA melting: Identifying the unknown sample
- DNA Melting Part 2: Lock-in Amplifier and Temperature Control
- DNA Melting Report Requirements for Part 2
Code examples and simulations
- DNA Melting: Simulating DNA Melting - Basics
- DNA Melting: Simulating DNA Melting - Intermediate Topics
- DNA Melting: Model function and parameter estimation by nonlinear regression
Reference materials
Background reading
Limits of detection mini-lab
- Lab Manual: Limits of Detection
- Lab Manual: Atomic Force Microscopy (AFM)
- Limits of Detection: Data Sessions
MRI mini-lab
(Kept for historical reasons.)
Useful things
Resource lists
<DynamicPageList> category = Resource list </DynamicPageList>
Matlab tutorials
<DynamicPageList> category = Matlab </DynamicPageList>
Projects
- eSTORM: super-resolution microscope for the classroom
