Difference between revisions of "20.109(S16): Spring 2016 schedule"

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| 3
 
| 3
 
| T/W Mar 15/16
 
| T/W Mar 15/16
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| [http://be.mit.edu/directory/leona-d-samson LDS]
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| [http://be.mit.edu/directory/leona-d-samson LDS]<br>[[Media:Final 20.109 Spring 2016 Lecture 3.pdf| M2D3 lecture]]
−
| [[20.109(S16):Complete Western and prepare damaged DNA (Day3) | Western and prepare damaged DNA]]<br>[[Media: S16_M2D3_LMM.pdf| Prelab T/R]]
+
| [[20.109(S16):Complete Western and prepare damaged DNA (Day3) | Western and prepare damaged DNA]]<br>[[Media: S16_M2D3_LMM.pdf| Prelab T/R]]<br>[[Media: Sp16_M2D3_160316_marked.pdf| Prelab W/F]]
 
| [[20.109(S16):Homework#Due_M2D3| Homework due]] <br> [[20.109(S16): Protein engineering presentation | Protein engineering mini-presentation due]] Tue/Wed, Mar 15/16 at 10 pm
 
| [[20.109(S16):Homework#Due_M2D3| Homework due]] <br> [[20.109(S16): Protein engineering presentation | Protein engineering mini-presentation due]] Tue/Wed, Mar 15/16 at 10 pm
 
|--
 
|--
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| 4
 
| 4
 
| R/F Mar 17/18
 
| R/F Mar 17/18
−
| [http://be.mit.edu/directory/noreen-lyell NLL]
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| [http://be.mit.edu/directory/noreen-lyell NLL] <br> [[Media:Sp16 M2D4 lecture slides.pdf| M2D4 lecture]]
 
| [[20.109(S16):Journal Club I (Day4)| Journal club I]]
 
| [[20.109(S16):Journal Club I (Day4)| Journal club I]]
 
| [[20.109(S16):Journal Club I (Day4)| Journal club I slides due]] Thu/Fri, Mar 17/18 at 1 pm
 
| [[20.109(S16):Journal Club I (Day4)| Journal club I slides due]] Thu/Fri, Mar 17/18 at 1 pm
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| 5
 
| 5
 
| T/W Mar 29/30
 
| T/W Mar 29/30
−
| [http://be.mit.edu/directory/leona-d-samson LDS]
+
| [http://be.mit.edu/directory/leona-d-samson LDS]<br>[[Media:Final 20 109 Spring 2016 Lecture 4.pdf| M2D5 lecture]]
−
| [[20.109(S16):Cell preparation for DNA repair assays (Day5)| Cell preparation]]
+
| [[20.109(S16):Cell preparation for DNA repair assays (Day5)| Cell tranfections for DNA repair assay]]<br>[[Media: S16_M2D5_LMM.pdf| Prelab T/R]]<br>[[Media: Sp16_M2D5_160330_marked.pdf| Prelab W/F]]
 
| <font color=#FF8000>'''Lab quiz'''</font color> <br> [[20.109(S16):Homework#Due_M2D5| Homework due]]<br> [[20.109(S16): Protein engineering summary | Protein engineering final report due]] Mon, Mar 28 at 5 pm
 
| <font color=#FF8000>'''Lab quiz'''</font color> <br> [[20.109(S16):Homework#Due_M2D5| Homework due]]<br> [[20.109(S16): Protein engineering summary | Protein engineering final report due]] Mon, Mar 28 at 5 pm
 
|--
 
|--
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| 6
 
| 6
 
| R/F Mar 31 / Apr 1
 
| R/F Mar 31 / Apr 1
−
| [http://be.mit.edu/directory/leona-d-samson LDS]
+
| [http://be.mit.edu/directory/leona-d-samson LDS]<br>[[Media:Final 20 109 Spring 2016 Lecture 5.pdf| M2D6 lecture]]
−
| [[20.109(S16):DNA repair assays (Day6) | DNA repair assays]]
+
| [[20.109(S16):DNA repair assays (Day6) | DNA repair assays]]<br>[[Media: S16_M2D6_LMM.pdf| Prelab T/R]]<br>[[Media: Sp16_M2D6_160401_marked.pdf| Prelab W/F]]
 
| [[20.109(S16):Homework#Due_M2D6| Homework due]]
 
| [[20.109(S16):Homework#Due_M2D6| Homework due]]
 
|--
 
|--
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| 7
 
| 7
 
| T/W Apr 5/6
 
| T/W Apr 5/6
−
| [http://be.mit.edu/directory/leona-d-samson LDS]
+
| [http://be.mit.edu/directory/leona-d-samson LDS]<br>[[Media:Final 20.109 Spring 2016 Lecture 6.pdf| M2D7 lecture]]
−
| [[20.109(S16):Flow cytometry and paper discussion (Day7)| Flow cytometry and paper discussion]]
+
| [[20.109(S16):Flow cytometry and paper discussion (Day7)| Flow cytometry data analysis and paper discussion]]<br>[[Media: S16_M2D7_LMM.pdf| Prelab T/R]]<br>[[Media: Sp16_M2D7_160406_marked.pdf| Prelab W/F]]
 
| [[20.109(S16):Homework#Due_M2D7| Homework due]]
 
| [[20.109(S16):Homework#Due_M2D7| Homework due]]
 
|--
 
|--
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| 8
 
| 8
 
| R/F Apr 7/8
 
| R/F Apr 7/8
−
| [https://be.mit.edu/communicationlab/meet-the-lab/meet-the-writing-fellows DC]
+
| [https://be.mit.edu/communicationlab/meet-the-lab/meet-the-writing-fellows DC]<br> [[Media:20.109 Lecture - Manuscript Architecture 2016.pdf| Manuscript lecture]]
 
| [[20.109(S16):Journal Club II (Day8)| Journal club II]]
 
| [[20.109(S16):Journal Club II (Day8)| Journal club II]]
 
| [[20.109(S16):Journal Club II (Day8)| Journal club II slides due]] Thu/Fri, Apr 7/8 at 1 pm
 
| [[20.109(S16):Journal Club II (Day8)| Journal club II slides due]] Thu/Fri, Apr 7/8 at 1 pm
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| T/W Apr 12/13
 
| T/W Apr 12/13
 
| [http://be.mit.edu/directory/noreen-lyell NLL]
 
| [http://be.mit.edu/directory/noreen-lyell NLL]
−
| [[20.109(S16):Data analysis (Day9)| Data analysis]]
+
| [[20.109(S16):Data analysis (Day9)| Statistical analysis of flow cytometry data]]<br>[[Media: S16_M2D9_LMM.pdf| Prelab T/R]]<br>[[Media: Sp16_M2D9_160413_marked.pdf| Prelab W/F]]
 
| <font color=#FF8000>'''Lab quiz'''</font color> <br> [[20.109(S16):Homework#Due_M2D9| Homework due]]
 
| <font color=#FF8000>'''Lab quiz'''</font color> <br> [[20.109(S16):Homework#Due_M2D9| Homework due]]
 
|--
 
|--
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| R/F Apr 14/15
 
| R/F Apr 14/15
 
| [http://be.mit.edu/directory/angela-belcher AB]   
 
| [http://be.mit.edu/directory/angela-belcher AB]   
−
| [[20.109(S16):Growth of phage materials (Day1)| Growth of phage materials]]
+
| [[20.109(S16):Growth of phage materials (Day1)| Growth of phage materials]]<br>[[Media: S16_M3D1_LMM.pdf| Prelab T/R]]<br>[[Media: Sp16_M3D1_160415_marked.pdf| Prelab W/F]]
 
| [[20.109(S16):Homework#Due_M3D1| Homework due]]
 
| [[20.109(S16):Homework#Due_M3D1| Homework due]]
 
|--
 
|--
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| R/F Apr 21/22
 
| R/F Apr 21/22
 
| [http://be.mit.edu/directory/angela-belcher AB]   
 
| [http://be.mit.edu/directory/angela-belcher AB]   
−
| [[20.109(S16):Purify active materials (Day2)| Phage nanowires]]
+
| [[20.109(S16):Purify active materials (Day2)| Phage nanowires]]<br>[[Media: S16_M3D2_LMM.pdf| Prelab T/R]]<br>[[Media: Sp16_M3D2_160422_marked.pdf| Prelab W/F]]
 
| [[20.109(S16):Homework#Due_M3D2| Homework due]]
 
| [[20.109(S16):Homework#Due_M3D2| Homework due]]
 
|--
 
|--
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| T/W Apr 26/27
 
| T/W Apr 26/27
 
| [http://be.mit.edu/directory/angela-belcher AB]   
 
| [http://be.mit.edu/directory/angela-belcher AB]   
−
| [[20.109(S16):Cathode construction (Day3)| Cathode construction]]
+
| [[20.109(S16):Cathode construction (Day3)| Cathode construction]]<br>[[Media: S16_M3D3_LMM.pdf| Prelab T/R]]<br>[[Media: Sp16_M3D3_160427_marked.pdf| Prelab W/F]]
 
| <font color=#FF8000>'''Lab quiz'''</font color> <br> [[20.109(S16):Homework#Due_M3D3| Homework due]]
 
| <font color=#FF8000>'''Lab quiz'''</font color> <br> [[20.109(S16):Homework#Due_M3D3| Homework due]]
 
|--  
 
|--  
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| T/W May 3/4   
 
| T/W May 3/4   
 
| [http://be.mit.edu/directory/angela-belcher AB]   
 
| [http://be.mit.edu/directory/angela-belcher AB]   
−
| [[20.109(S16):TEM (Day4)| TEM]]
+
| [[20.109(S16):TEM (Day4)| TEM]]<br>[[Media: S16_M3D4_LMM.pdf| Prelab T/R]]<br>[[Media: Sp16_M3D4_160504_marked.pdf| Prelab W/F]]
 
| [[20.109(S16):Homework#Due_M3D4| Homework due]]
 
| [[20.109(S16):Homework#Due_M3D4| Homework due]]
 
|--
 
|--
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| R/F May 5/6
 
| R/F May 5/6
 
| [http://be.mit.edu/directory/angela-belcher AB]   
 
| [http://be.mit.edu/directory/angela-belcher AB]   
−
| [[20.109(S16):Battery assembly and testing (Day5)| Battery assembly and testing]]
+
| [[20.109(S16):Battery assembly and testing (Day5)| Battery assembly and testing]]<br>[[Media: S16_M3D5_LMM.pdf| Prelab T/R]]<br>[[Media: Sp16_M3D5_160506_marked.pdf| Prelab W/F]]
 
| <font color=#FF8000>'''Lab quiz'''</font color> <br> [[20.109(S16):Homework#Due_M3D5| Homework due]]<br>[[20.109(S16): Biomaterials engineering report | Biomaterials engineering mini-report due]] Thu/Fri, May 5/6 at 10 pm
 
| <font color=#FF8000>'''Lab quiz'''</font color> <br> [[20.109(S16):Homework#Due_M3D5| Homework due]]<br>[[20.109(S16): Biomaterials engineering report | Biomaterials engineering mini-report due]] Thu/Fri, May 5/6 at 10 pm
 
|--
 
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Latest revision as of 20:44, 6 May 2016

20.109(S16): Laboratory Fundamentals of Biological Engineering

S16 TemplateImage.png

Home        People        Schedule Spring 2016        Assignments        Homework        Lab Basics        Wiki Basics       
Protein Engineering        System Engineering        Biomaterials Engineering              

MOD DAY DATE LECTURER LABORATORY EXPERIMENTS ASSIGNMENTS
T/W Feb 2/3 NLL
Orientation lecture 		Orientation
Prelab T/R

Prelab W/F

1 1 R/F Feb 4/5 NLL
M1D1 lecture 		In silico cloning
Prelab W/F 		Lab orientation quiz
Homework due
1 2 T/W Feb 9/10 NLL
M1D2 lecture 		Design mutation primers
Prelab T/R
Prelab W/F 		Homework due
1 3 R/F Feb 11/12 NLL
M1D3 lecture 		Site-directed mutagenesis
Prelab T/R
Prelab W/F 		Homework due
T/W Feb 16/17 Presidents' day holiday
1 4 R/F Feb 18/19 NLL
M1D4 lecture 		Prepare expression system
Prelab T/R
Prelab W/F 		Lab quiz
Homework due
1 5 T/W Feb 23/24 DC
Abstract lecture 		Induce protein expression
Prelab T/R
Prelab W/F
1 6 R/F Feb 25/26 NLL
M1D6 lecture 		Purify protein
Prelab T/R
Prelab W/F 		Homework due
1 7 T/W Mar 1/2 NLL
M1D7 lecture 		Characterize protein expression
Prelab T/R
Prelab W/F 		Homework due
1 8 R/F Mar 3/4 MJ
M1D8 lecture 		Assess protein function
Prelab T/R
Prelab W/F 		Lab quiz
Homework due
2 1 T/W Mar 8/9 LDS
M2D1 lecture 		Introduction to cell strains and plating
Prelab T/R
Prelab W/F 		Homework due
2 2 R/F Mar 10/11 LDS
M2D2 lecture 		Western analysis and system conditions
Prelab T/R
Prelab W/F 		Homework due
Protein engineering summary draft due Sat, Mar 12 at 5 pm
2 3 T/W Mar 15/16 LDS
M2D3 lecture 		Western and prepare damaged DNA
Prelab T/R
Prelab W/F 		Homework due
Protein engineering mini-presentation due Tue/Wed, Mar 15/16 at 10 pm
2 4 R/F Mar 17/18 NLL
M2D4 lecture 		Journal club I Journal club I slides due Thu/Fri, Mar 17/18 at 1 pm
T/W Mar 22/23 Spring vacation
R/F Mar 24/25 Spring vacation
2 5 T/W Mar 29/30 LDS
M2D5 lecture 		Cell tranfections for DNA repair assay
Prelab T/R
Prelab W/F 		Lab quiz
Homework due
Protein engineering final report due Mon, Mar 28 at 5 pm
2 6 R/F Mar 31 / Apr 1 LDS
M2D6 lecture 		DNA repair assays
Prelab T/R
Prelab W/F 		Homework due
2 7 T/W Apr 5/6 LDS
M2D7 lecture 		Flow cytometry data analysis and paper discussion
Prelab T/R
Prelab W/F 		Homework due
2 8 R/F Apr 7/8 DC
Manuscript lecture 		Journal club II Journal club II slides due Thu/Fri, Apr 7/8 at 1 pm
2 9 T/W Apr 12/13 NLL Statistical analysis of flow cytometry data
Prelab T/R
Prelab W/F 		Lab quiz
Homework due
3 1 R/F Apr 14/15 AB Growth of phage materials
Prelab T/R
Prelab W/F 		Homework due
T/W Apr 19/20 Patriots' day holiday System engineering research article due Mon, Apr 18 at 5 pm
3 2 R/F Apr 21/22 AB Phage nanowires
Prelab T/R
Prelab W/F 		Homework due
3 3 T/W Apr 26/27 AB Cathode construction
Prelab T/R
Prelab W/F 		Lab quiz
Homework due
R/F Apr 28/29 AB Lecture, but no laboratory
3 4 T/W May 3/4 AB TEM
Prelab T/R
Prelab W/F 		Homework due
3 5 R/F May 5/6 AB Battery assembly and testing
Prelab T/R
Prelab W/F 		Lab quiz
Homework due
Biomaterials engineering mini-report due Thu/Fri, May 5/6 at 10 pm
3 6 T/W May 10/11 Research proposal presentations Research proposal presentation slides due Tue/Wed, May 10/11 at 1pm
R May 12 Feedback and celebratory lunch
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