Difference between revisions of "20.109(S18): Prep notes for M1"

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(M2D2)
Line 5: Line 5:
 
==M1D1==
 
==M1D1==
 
*restriction enzymes and buffers
 
*restriction enzymes and buffers
 +
*filtered pipet tips
  
 
==M1D2==
 
==M1D2==
 
'''prior to laboratory:'''
 
'''prior to laboratory:'''
 +
 
*prepare 1% agarose gels, 1 per 2 teams
 
*prepare 1% agarose gels, 1 per 2 teams
 
*subculture BL21(DE3) pRSETb_FKBP12 1:10 into 50 mL LB containing 100μg / mL amp and 34 μg / mL cam, 1 per team
 
*subculture BL21(DE3) pRSETb_FKBP12 1:10 into 50 mL LB containing 100μg / mL amp and 34 μg / mL cam, 1 per team
  
'''on front bench (per team):'''
+
'''per team:'''
  
 
*X μL 6x loading dye
 
*X μL 6x loading dye
 
*Y μL 1 M IPTG
 
*Y μL 1 M IPTG
  
==M2D2==
+
==M2D3==
'''on front bench (per team):'''
+
'''per team:'''
  
 
*lysis buffer reagents
 
*lysis buffer reagents
Line 28: Line 30:
 
*3.5 mL 1X PBS containing 250 mM imidazole
 
*3.5 mL 1X PBS containing 250 mM imidazole
  
==M2D3==
+
==M2D4==
'''on front bench (per team):'''
+
'''prior to laboratory:'''
 +
 
 +
*boil prep stained and unstained molecular weight standards, if required
 +
*prepare electrophoresis buffer, 1 chamber volume per 2 teams
 +
 
 +
'''per team:'''
  
 
*20 μL Laemmli buffer
 
*20 μL Laemmli buffer
*
+
*50 mL coomassie stain
 +
*BSA reagents
 +
**110 μL albumin
 +
**1300 μL 1X PBS
 +
**X μL BCA Reagent A
 +
**Y μL BCA Reagent B
 +
 
 +
==M2D5==
 +
'''per team:'''
 +
 
 +
*18 μL 1 mg/mL FKBP12
 +
*buffer reagents
 +
**X μL 1 M Tris-HCL pH=8
 +
**Y &mu;L 100 mM CaCl<sub>2</sub>
 +
**Z &mu;L chymotrypsin
 +
 
 +
==M2D6==
 +
'''per team:'''
 +
 
 +
*18 &mu;L 1 mg/mL FKBP12

Revision as of 21:42, 31 January 2018

20.109(S18): Laboratory Fundamentals of Biological Engineering

Sp18 banner image v2.png

Spring 2018 schedule        FYI        Assignments        Homework        Class data        Communication
       1. Assessing ligand binding        2. Measuring gene expression        3. Engineering biomaterials              


M1D1

  • restriction enzymes and buffers
  • filtered pipet tips

M1D2

prior to laboratory:

  • prepare 1% agarose gels, 1 per 2 teams
  • subculture BL21(DE3) pRSETb_FKBP12 1:10 into 50 mL LB containing 100μg / mL amp and 34 μg / mL cam, 1 per team

per team:

  • X μL 6x loading dye
  • Y μL 1 M IPTG

M2D3

per team:

  • lysis buffer reagents
  • 250 μL slurry
  • 7 mL 1X PBS
  • Y μL 1 M MgCl2
  • 12 μL DNase
  • 1.7 mL 1X PBS containing 10 mM imidazole
  • 3.5 mL 1X PBS containing 250 mM imidazole

M2D4

prior to laboratory:

  • boil prep stained and unstained molecular weight standards, if required
  • prepare electrophoresis buffer, 1 chamber volume per 2 teams

per team:

  • 20 μL Laemmli buffer
  • 50 mL coomassie stain
  • BSA reagents
    • 110 μL albumin
    • 1300 μL 1X PBS
    • X μL BCA Reagent A
    • Y μL BCA Reagent B

M2D5

per team:

  • 18 μL 1 mg/mL FKBP12
  • buffer reagents
    • X μL 1 M Tris-HCL pH=8
    • Y μL 100 mM CaCl2
    • Z μL chymotrypsin

M2D6

per team:

  • 18 μL 1 mg/mL FKBP12