Difference between revisions of "Talk:20.109(F16):Module 2"
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===M2D5/M2D7: sequencing data=== | ===M2D5/M2D7: sequencing data=== | ||
+ | |||
+ | ====W/F: ethanol==== | ||
+ | |||
+ | {| border=1px | ||
+ | |'''Team''' | ||
+ | |'''pgRNA sequencing''' | ||
+ | |- | ||
+ | |red | ||
+ | |[[Media:WFred_sequencing.zip| files]] | ||
+ | |- | ||
+ | |green | ||
+ | |[[Media:WFgreen_sequencing.zip| files]] | ||
+ | |- | ||
+ | |blue | ||
+ | |[[Media:WFblue_sequencing.zip| files]] | ||
+ | |- | ||
+ | |purple | ||
+ | |[[Media:WFpurple_sequencing.zip| files]] | ||
+ | |} |
Revision as of 14:26, 2 November 2016
Contents
Module 2 Data
M2D2: gRNA design
T/R: lactate
Team | Gene targeted by CRISPRi gRNA |
gRNA sequence (without tag at 3' end) |
Locus targeted (e.g. beginning of gene, putative promoter, -35 region) |
yellow | pflB | TGTCGAAGTACGCAGTAAAT | |
green | pflB | ATAAAAAATCCACTTAAGAAGGTA | |
blue | pflB | TTCATTAAGCTCGGACATGTAACA | |
pink | pflB | AAATAAAAAATCCACTTAAGAAGGT | |
purple | pflB | AAATCCACTTAAGAAGGTAGGTGT |
W/F: ethanol
Team | Gene targeted by CRISPRi gRNA |
gRNA sequence (without tag at 3' end) |
Locus targeted (e.g. beginning of gene, putative promoter, -35 region) |
red | pta-ack | GCC ACG TAT CAA TTA TAG GTA C | |
green | ldhA | GTAGCTTAAATGTGATTCAACATC | |
blue | fdrA | CAAGATCGGCTTGAAAGGTTTGCAC | |
purple | ldhA | TCGTACTGTTTTGTGCTATAAA |
M2D5/M2D7: sequencing data
W/F: ethanol
Team | pgRNA sequencing |
red | files |
green | files |
blue | files |
purple | files |