Difference between revisions of "20.109(F21):Fall 2021 schedule"

From Course Wiki
Jump to: navigation, search
Line 122: Line 122:
 
|  
 
|  
 
| [http://be.mit.edu/directory/noreen-lyell NLL] <br>
 
| [http://be.mit.edu/directory/noreen-lyell NLL] <br>
| [[20.109(F21):M2D5 |Learn best practices for mammalian cell culture ]] <br> [[Media:Sp21 M2D5 bcm marked.pdf | T/R Prelab]]<br> [[Media:Sp21_M2D5_lmm.pdf| W/F Prelab]]
+
| [[20.109(F21):M2D5 |Placeholder]] <br>  
| [[20.109(S21):Homework#Due_M2D5|Homework due]]<br>
+
| [[20.109(F21):Homework#Due_M2D5|Homework due]]<br>
 
|--
 
|--
 
| M2D6
 
| M2D6
 
|  
 
|  
 
| [http://be.mit.edu/directory/noreen-lyell NLL] <br>
 
| [http://be.mit.edu/directory/noreen-lyell NLL] <br>
| [[20.109(S21):M2D6 |Utilize cellular thermal shift assay (CETSA) to test putative small molecule binders]] <br> [[Media:Sp21 M2D6 JCH update.pdf| T/R Prelab]]<br> [[Media:Sp21 M2D6 lmm.pdf| W/F Prelab]]
+
| [[20.109(F21):M2D6 |Placeholder]] <br>  
| [[20.109(S21):Homework#Due_M2D6|Homework due]]<br>
+
| [[20.109(F21):Homework#Due_M2D6|Homework due]]<br>
 
|--
 
|--
 
|  
 
|  
Line 141: Line 141:
 
| [http://be.mit.edu/directory/noreen-lyell NLL] <br>
 
| [http://be.mit.edu/directory/noreen-lyell NLL] <br>
 
| [[20.109(F21):M2D7 |Placeholder]] <br>  
 
| [[20.109(F21):M2D7 |Placeholder]] <br>  
| <font color= #d98880 >'''Laboratory quiz'''</font color> <br> [[20.109(S21):Homework#Due_M2D7|Homework due]]<br>
+
| <font color= #d98880 >'''Laboratory quiz'''</font color> <br> [[20.109(F21):Homework#Due_M2D7|Homework due]]<br>
 
|--
 
|--
 
| colspan="6" |
 
| colspan="6" |
 
|--
 
|--
 
| M3D1
 
| M3D1
| T/W Apr 27/28
+
|  
| [http://be.mit.edu/directory/alan-p-jasanoff AJ] <br> [[Media:2021 lect1 overview nomovies.pptx|Slides]]
+
| [http://be.mit.edu/directory/jacquin-c-niles JN]<br>  
| [[20.109(S21):M3D1 |Review IPC literature and examine structural characteristics]] <br> [[Media:Sp21 M3D1 bcm marked.pdf| T/R Prelab]]<br> [[Media:Sp21_M3D1_lmm.pdf | W/F Prelab]]
+
| [[20.109(F21):M3D1 |Placeholder]] <br>  
| [[20.109(S21):Homework#Due_M3D1|Homework due]] <br>
+
| [[20.109(F21):Homework#Due_M3D1|Homework due]] <br>
 
|--
 
|--
 
| M3D2
 
| M3D2
| R/F Apr 29/30
+
|  
| [http://be.mit.edu/directory/alan-p-jasanoff AJ]<br> [[Media:2021 lect2 rationaldesign.pptx|Slides]]
+
| [http://be.mit.edu/directory/jacquin-c-niles JN]<br>  
| [[20.109(S21):M3D2 |Identify IPC mutations]] <br> [[Media:Sp21 M3D2 bcm marked.pdf| T/R prelab]]<br> [[Media:Sp21_M3D2_CP.pdf| W/F prelab]]
+
| [[20.109(F21):M3D2 |Placeholder]] <br>  
| [[20.109(S21):Homework#Due_M3D2|Homework due]] <br> [[20.109(S21):Research article| <font color =  #b3251c>'''Research article due'''</font color>]]  Sun, May 2 at 10 pm <br> [http://app.slack.com/client/T01KU1VLZQB/C01KQNPD3UM Blog post due] Mon, May 3 at 10 pm
+
| [[20.109(F21):Homework#Due_M3D2|Homework due]] <br> [[20.109(F21):Research article| <font color =  #a93226 >'''Research article due'''</font color>]]  Day, Mth XX at 10 pm <br> [ Blog post due] Day, Mth XX at 10 pm
 
|--
 
|--
 
| M3D3
 
| M3D3
| T/W May 4/5
+
|  
| [http://be.mit.edu/directory/alan-p-jasanoff AJ] <br> [[Media:2021 lect3 binding.pptx|Slides]]
+
| [http://be.mit.edu/directory/jacquin-c-niles JN]<br>  
| [[20.109(S21):M3D3 |Evaluate effect of mutations on IPC variants ]] <br> [[media:Sp21 M3D3 bcm marked.pdf| T/R prelab]] <br> [[media:Sp21_M3D3_lmm.pdf| W/F prelab]]
+
| [[20.109(F21):M3D3 |Placeholder]] <br>  
| [[20.109(S21):Homework#Due_M3D3|Homework due]]<br>
+
| [[20.109(F21):Homework#Due_M3D3|Homework due]]<br>
 
|--  
 
|--  
 
|  
 
|  
 
| R/F May 6/7
 
| R/F May 6/7
 
| Research proposal pitches <br>  
 
| Research proposal pitches <br>  
| [[Develop Research proposal ideas and presentations|Develop Research proposal ideas and presentations]] <br> [[Media:Sp21 Societal M3D4 HW ex.pdf| Prompts for discussion/homework]]
+
| [[Develop Research proposal ideas and presentations|Develop Research proposal ideas and presentations]] <br>  
 
|
 
|
 
|--
 
|--
 
| M3D4
 
| M3D4
| T/W May 11/12
+
|  
| [http://be.mit.edu/directory/alan-p-jasanoff AJ] <br> [[Media:2021 lect4 fluorescence.pptx|Slides]]
+
| [http://be.mit.edu/directory/jacquin-c-niles JN]<br>  
| [[20.109(S21):M3D4 |Design new IPC variant ]] <br> [[Media:Sp21 M3D4 bcm.pdf| T/R prelab]]<br> [[Media:Sp21_M3D4_lmm.pdf | W/F prelab]]
+
| [[20.109(F21):M3D4 |Placeholder]] <br>  
| <font color= #d98880 >'''Laboratory quiz''' <br>[[20.109(S21):Homework#Due_M3D5|Homework due]]
+
| <font color= #d98880 >'''Laboratory quiz''' <br>[[20.109(F21):Homework#Due_M3D5|Homework due]]
 
|--
 
|--
 
|  
 
|  
 
| R/F May 13/14
 
| R/F May 13/14
| [http://be.mit.edu/directory/alan-p-jasanoff AJ] <br> [[Media:2021 lect5 screening.pptx|Slides]]
+
| [http://be.mit.edu/directory/jacquin-c-niles JN]<br>  
| [[20.109(S21):Mini-report | <font color =  #b3251c>'''Mini-report due'''</font color>]] by 10 pm  
+
| [[20.109(F21):Mini-report | <font color =  #a93226 >'''Mini-report due'''</font color>]] by 10 pm  
 
|  
 
|  
 
|--
 
|--
Line 184: Line 184:
 
| T/W May 18/19
 
| T/W May 18/19
 
|  
 
|  
| [[20.109(S21):Research proposal presentation| <font color =  #b3251c>'''Research proposal presentations'''</font color>]]
+
| [[20.109(F21):Research proposal presentation| <font color =  #a93226 >'''Research proposal presentations'''</font color>]]
| [http://app.slack.com/client/T01KU1VLZQB/C01KQNPD3UM Blog post due] Thu, May 20 at 10 pm
+
| [ Blog post due] Day, Mth XX at 10 pm
 
|--
 
|--
 
| colspan="6" |
 
| colspan="6" |
Line 191: Line 191:
 
|  
 
|  
 
| R May 20
 
| R May 20
| <font color =  #0d368e>'''Feedback session'''</font color> <br>
+
| <font color =  #0d368e>'''Feedback session and lunch'''</font color> <br>
 
|   
 
|   
 
|  
 
|  
 
|}
 
|}
 
</div>
 
</div>

Revision as of 21:40, 9 July 2021

20.109(F21): Laboratory Fundamentals of Biological Engineering
Drawing provided by Marissa A., 20.109 student in Sp21 term.  Schematic generated using BioRender.

Fall 2021 schedule        FYI        Assignments        Homework        Class data        Communication        Accessibility

       Module 1: Genomic instability                          Module 2: Drug discovery       


Welcome to 20.109! It is our goal to make this class a useful and fun introduction to the experiments and techniques used in biological engineering. Though there is not enough time to show you everything needed to do research, after this class you will feel confident and familiar with some fundamental experimental approaches and laboratory protocols. You will develop good habits at the bench, which will increase the likelihood of success in your work and ensure the health and safety of you and your labmates. By the end of the semester, you will also be well-versed in good scientific practices - through your experience with scientific writing, notebook keeping, and orally presenting data and novel ideas. All of us involved in teaching 20.109 hope you will find it a satisfying challenge and an exciting experience that has lasting value.

SCHEDULE DETAILS:
Lecture times:

  • Tuesday (T) and Thursday (R) 11 - 12 pm

Laboratory section times:

  • Tuesday (T) and Thursday (R) 1 - 5 pm
  • Wednesday (W) and Friday (F) 1 - 5 pm
MODULE DATE LECTURER LABORATORY EXPERIMENTS ASSIGNMENTS
NLL
[[ |Slides]]
Orientation and laboratory tour
M1D1 BE
Placeholder
Orientation quiz
Homework due
M1D2 BE
Placeholder
Homework due
M1D3 BE
Placeholder
Homework due
M1D4 BE
Placeholder
Laboratory quiz
Homework due
M1D5 BE
Placeholder
Homework due
T/W Mar 9/10 Student holiday
M1D6 BE
Placeholder
Homework due
M1D7 BE
Placeholder
Laboratory quiz
Homework due
M2D1 NLL
Placeholder
Homework due
T/W Mar 23/24 Student holiday Data Summary draft due Day, Mth XX at 10 pm
M2D2 NLL
Placeholder
Homework due
Mini-presentation due Day, Mth XX at 10 pm
[ Blog post due] Day, Mth XX at 10 pm
M2D3 NLL
Placeholder
Homework due
M2D4 NLL
Placeholder
Laboratory quiz
Homework due
Data Summary revision due Day, Mth XX at 10 pm
T/W Apr 6/7 Journal club presentations
R/F Apr 8/9 Journal club presentations [ Blog post due] Day, Mth XX at 10 pm
M2D5 NLL
Placeholder
Homework due
M2D6 NLL
Placeholder
Homework due
T/W Apr 20/21 Student holiday
M2D7 NLL
Placeholder
Laboratory quiz
Homework due
M3D1 JN
Placeholder
Homework due
M3D2 JN
Placeholder
Homework due
Research article due Day, Mth XX at 10 pm
[ Blog post due] Day, Mth XX at 10 pm
M3D3 JN
Placeholder
Homework due
R/F May 6/7 Research proposal pitches
Develop Research proposal ideas and presentations
M3D4 JN
Placeholder
Laboratory quiz
Homework due
R/F May 13/14 JN
Mini-report due by 10 pm
T/W May 18/19 Research proposal presentations [ Blog post due] Day, Mth XX at 10 pm
R May 20 Feedback session and lunch

</div>