Talk:20.109(S16):Flow cytometry and paper discussion (Day7)
Contents
Files to download for analysis:
Instructor samples
Student samples
Tables for group data:
Report both the median and mean calculations for each replicate within the table according to the following format: median value, mean value
TR section
TR Red Team: (insert condition information here - enzymes and drug used)
Sample | Normalized EGFP/mCherry value (replicate #1) | Normalized EGFP/mCherry value (replicate #2) |
---|---|---|
M059K mCherry:EGFP | 2.2, 1.9 | 2.4, 3.0 |
M059K mCherry:EGFP + drug | 2.4, 2.2 | 1.9, 1.0 |
M059J mCherry:EGFP | 3.0, 3.0 | 2.9, 2.8 |
M059K mCherry:damaged EGFP | 0.11, 0.05 | 0.13, 0.12 |
M059K mCherry:damaged EGFP + drug | 0.17, 0.27 | 0.04, 0.05 |
M059J mCherry:damaged EGFP | 0, 0 | 0, 0 |
TR Orange Team: (insert condition information here - enzymes and drug used)
Sample | Normalized EGFP/mCherry value (replicate #1) | Normalized EGFP/mCherry value (replicate #2) |
---|---|---|
M059K mCherry:EGFP | 2.09, 1.77 | 2.54, 2.60 |
M059K mCherry:EGFP + drug | 3.04, 1.95 | 2.58, 3.49 |
M059J mCherry:EGFP | 4.11, 2.09 | 2.70, 1.65 |
M059K mCherry:damaged EGFP | 0.24, 0.21 | 0.21, 0.13 |
M059K mCherry:damaged EGFP + drug | 0.07, 0.08 | 0.18, 0.21 |
M059J mCherry:damaged EGFP | 0.01, 0.03 | 0.04, 0.02 |
TR Yellow Team: (BglII PstI DMNB)
Sample | Normalized EGFP/mCherry value (replicate #1) | Normalized EGFP/mCherry value (replicate #2) |
---|---|---|
M059K mCherry:EGFP | 2.4, 2.4 | 2.2, 2.6 |
M059K mCherry:EGFP + drug | 2.2, 2.2 | 2.4, 2.8 |
M059J mCherry:EGFP | 3.2, 3.0 | 2.6, 2.2 |
M059K mCherry:damaged EGFP | 0.18, 0.15 | 0.18, .18 |
M059K mCherry:damaged EGFP + drug | 0.19, 0.61 | 0.025, 0.030 |
M059J mCherry:damaged EGFP | 0 | 0 |
TR Green Team: (PmeI and Loperamide)
Sample | Normalized EGFP/mCherry value (replicate #1) | Normalized EGFP/mCherry value (replicate #2) |
---|---|---|
M059K mCherry:EGFP | 3.03, 2.26 | 2.44, 2.34 |
M059K mCherry:EGFP + drug | 2.88, 2.07 | 3.05, 2.20 |
M059J mCherry:EGFP | 2.07, 3.01 | 1.75, 2.12 |
M059K mCherry:damaged EGFP | 0.25, 0.24 | 0.19, 0.34 |
M059K mCherry:damaged EGFP + drug | 0.12, 0.31 | 0.16, 0.29 |
M059J mCherry:damaged EGFP | 0.05, 0.02 | 0, 0 |
TR Blue Team: (EcoRI + BglII - Loperamide)
Sample | Normalized EGFP/mCherry value (replicate #1) | Normalized EGFP/mCherry value (replicate #2) |
---|---|---|
M059K mCherry:EGFP | 2.252,2.358 | 2.422,2.271 |
M059K mCherry:EGFP + drug | 2.088,2.223 | 1.758,2.218 |
M059J mCherry:EGFP | 2.847,3.344 | 2.560,3.024 |
M059K mCherry:damaged EGFP | 0.104,0.085 | 0.146,0.204 |
M059K mCherry:damaged EGFP + drug | 0.133,0.109 | 0.087,0.114 |
M059J mCherry:damaged EGFP | 0.005,0.002 | 0.079,0.037 |
TR Pink Team: EcoRI-BglII DMNB
Sample | Normalized EGFP/mCherry value (replicate #1) | Normalized EGFP/mCherry value (replicate #2) |
---|---|---|
M059K mCherry:EGFP | 1.93, 2.21 | 2.97, 2.39 |
M059K mCherry:EGFP + drug | 2.20, 2.38 | 0.98, 1.92 |
M059J mCherry:EGFP | 2.92, 2,96 | 2.79, 2.90 |
M059K mCherry:damaged EGFP | 0.05, 0.11 | 0.11, 0.13 |
M059K mCherry:damaged EGFP + drug | 0.27, 0.17 | 0.05, 0.03 |
M059J mCherry:damaged EGFP | 0, 0 | 0,0 |
TR Purple Team: PmeI DMNB
Sample | Normalized EGFP/mCherry value (replicate #1) | Normalized EGFP/mCherry value (replicate #2) |
---|---|---|
M059K mCherry:EGFP | 1.772724608, 2.085453242 | 2.600281239, 2.537742473 |
M059K mCherry:EGFP + drug | 1.948901491, 3.044622474 | 3.487826161, 2.579098259 |
M059J mCherry:EGFP | 2.092658688, 4.11618439 | 1.651441549, 2.700436438 |
M059K mCherry:damaged EGFP | 0.207545736, 0.240272044 | 0.133947935, 0.214451077 |
M059K mCherry:damaged EGFP + drug | 0.084415562, 0.074686032 | 0.208750497, 0.175961141 |
M059J mCherry:damaged EGFP | 0.026551063, 0.011684889 | 0.015829439, 0.04141871 |
WF section
WF Red Team: (insert condition information here - enzymes and drug used)
Sample | Normalized EGFP/mCherry value (replicate #1) | Normalized EGFP/mCherry value (replicate #2) |
---|---|---|
M059K mCherry:EGFP | ||
M059K mCherry:EGFP + drug | ||
M059J mCherry:EGFP | ||
M059K mCherry:damaged EGFP | ||
M059K mCherry:damaged EGFP + drug | ||
M059J mCherry:damaged EGFP |
WF Orange Team: (insert condition information here - enzymes and drug used)
Sample | Normalized EGFP/mCherry value (replicate #1) | Normalized EGFP/mCherry value (replicate #2) |
---|---|---|
M059K mCherry:EGFP | ||
M059K mCherry:EGFP + drug | ||
M059J mCherry:EGFP | ||
M059K mCherry:damaged EGFP | ||
M059K mCherry:damaged EGFP + drug | ||
M059J mCherry:damaged EGFP |
WF Blue Team: (PmeI Loperamide)
Sample | Normalized EGFP/mCherry value (replicate #1) | Normalized EGFP/mCherry value (replicate #2) |
---|---|---|
M059K mCherry:EGFP | 8.4, 10.7 | 7.8, 14.4 |
M059K mCherry:EGFP + drug | 4.3, 15.1 | 5.3, 13.1 |
M059J mCherry:EGFP | 2.4, 0.5 | 0, 0 |
M059K mCherry:damaged EGFP | ||
M059K mCherry:damaged EGFP + drug | ||
M059J mCherry:damaged EGFP |
WF Pink Team: (insert condition information here - enzymes and drug used)
Sample | Normalized EGFP/mCherry value (replicate #1) | Normalized EGFP/mCherry value (replicate #2) |
---|---|---|
M059K mCherry:EGFP | ||
M059K mCherry:EGFP + drug | ||
M059J mCherry:EGFP | ||
M059K mCherry:damaged EGFP | ||
M059K mCherry:damaged EGFP + drug | ||
M059J mCherry:damaged EGFP |
WF Purple Team: (insert condition information here - enzymes and drug used)
Sample | Normalized EGFP/mCherry value (replicate #1) | Normalized EGFP/mCherry value (replicate #2) |
---|---|---|
M059K mCherry:EGFP | ||
M059K mCherry:EGFP + drug | ||
M059J mCherry:EGFP | ||
M059K mCherry:damaged EGFP | ||
M059K mCherry:damaged EGFP + drug | ||
M059J mCherry:damaged EGFP |