Difference between revisions of "Talk:20.109(S16):Flow cytometry and paper discussion (Day7)"
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|M059K mCherry:EGFP | |M059K mCherry:EGFP | ||
− | | | + | |0.06, 0.05 |
− | | | + | |0.05, 0.06 |
|- | |- | ||
|M059K mCherry:EGFP + drug | |M059K mCherry:EGFP + drug | ||
− | | | + | |0.03, 0.03 |
− | | | + | |0.02, 0.03 |
|- | |- | ||
|M059J mCherry:EGFP | |M059J mCherry:EGFP | ||
− | | | + | |0.01, 0.01 |
− | | | + | |0.01, 0.00 |
|- | |- | ||
|M059K mCherry:damaged EGFP | |M059K mCherry:damaged EGFP |
Revision as of 19:41, 6 April 2016
Contents
Files to download for analysis:
Instructor samples
Student samples
Tables for group data:
Report both the median and mean calculations for each replicate within the table according to the following format: median value, mean value
TR section
TR Red Team: (insert condition information here - enzymes and drug used)
Sample | Normalized EGFP/mCherry value (replicate #1) | Normalized EGFP/mCherry value (replicate #2) |
---|---|---|
M059K mCherry:EGFP | 2.2, 1.9 | 2.4, 3.0 |
M059K mCherry:EGFP + drug | 2.4, 2.2 | 1.9, 1.0 |
M059J mCherry:EGFP | 3.0, 3.0 | 2.9, 2.8 |
M059K mCherry:damaged EGFP | 0.11, 0.05 | 0.13, 0.12 |
M059K mCherry:damaged EGFP + drug | 0.17, 0.27 | 0.04, 0.05 |
M059J mCherry:damaged EGFP | 0, 0 | 0, 0 |
TR Orange Team: (insert condition information here - enzymes and drug used)
Sample | Normalized EGFP/mCherry value (replicate #1) | Normalized EGFP/mCherry value (replicate #2) |
---|---|---|
M059K mCherry:EGFP | 2.09, 1.77 | 2.54, 2.60 |
M059K mCherry:EGFP + drug | 3.04, 1.95 | 2.58, 3.49 |
M059J mCherry:EGFP | 4.11, 2.09 | 2.70, 1.65 |
M059K mCherry:damaged EGFP | 0.24, 0.21 | 0.21, 0.13 |
M059K mCherry:damaged EGFP + drug | 0.07, 0.08 | 0.18, 0.21 |
M059J mCherry:damaged EGFP | 0.01, 0.03 | 0.04, 0.02 |
TR Yellow Team: (BglII PstI DMNB)
Sample | Normalized EGFP/mCherry value (replicate #1) | Normalized EGFP/mCherry value (replicate #2) |
---|---|---|
M059K mCherry:EGFP | 2.4, 2.4 | 2.2, 2.6 |
M059K mCherry:EGFP + drug | 2.2, 2.2 | 2.4, 2.8 |
M059J mCherry:EGFP | 3.2, 3.0 | 2.6, 2.2 |
M059K mCherry:damaged EGFP | 0.18, 0.15 | 0.18, .18 |
M059K mCherry:damaged EGFP + drug | 0.19, 0.61 | 0.025, 0.030 |
M059J mCherry:damaged EGFP | 0 | 0 |
TR Green Team: (PmeI and Loperamide)
Sample | Normalized EGFP/mCherry value (replicate #1) | Normalized EGFP/mCherry value (replicate #2) |
---|---|---|
M059K mCherry:EGFP | 3.03, 2.26 | 2.44, 2.34 |
M059K mCherry:EGFP + drug | 2.88, 2.07 | 3.05, 2.20 |
M059J mCherry:EGFP | 2.07, 3.01 | 1.75, 2.12 |
M059K mCherry:damaged EGFP | 0.25, 0.24 | 0.19, 0.34 |
M059K mCherry:damaged EGFP + drug | 0.12, 0.31 | 0.16, 0.29 |
M059J mCherry:damaged EGFP | 0.05, 0.02 | 0, 0 |
TR Blue Team: (EcoRI + BglII - Loperamide)
Sample | Normalized EGFP/mCherry value (replicate #1) | Normalized EGFP/mCherry value (replicate #2) |
---|---|---|
M059K mCherry:EGFP | 2.252,2.358 | 2.422,2.271 |
M059K mCherry:EGFP + drug | 2.088,2.223 | 1.758,2.218 |
M059J mCherry:EGFP | 2.847,3.344 | 2.560,3.024 |
M059K mCherry:damaged EGFP | 0.104,0.085 | 0.146,0.204 |
M059K mCherry:damaged EGFP + drug | 0.133,0.109 | 0.087,0.114 |
M059J mCherry:damaged EGFP | 0.005,0.002 | 0.079,0.037 |
TR Pink Team: EcoRI-BglII DMNB
Sample | Normalized EGFP/mCherry value (replicate #1) | Normalized EGFP/mCherry value (replicate #2) |
---|---|---|
M059K mCherry:EGFP | 1.93, 2.21 | 2.97, 2.39 |
M059K mCherry:EGFP + drug | 2.20, 2.38 | 0.98, 1.92 |
M059J mCherry:EGFP | 2.92, 2,96 | 2.79, 2.90 |
M059K mCherry:damaged EGFP | 0.05, 0.11 | 0.11, 0.13 |
M059K mCherry:damaged EGFP + drug | 0.27, 0.17 | 0.05, 0.03 |
M059J mCherry:damaged EGFP | 0, 0 | 0,0 |
TR Purple Team: PmeI DMNB
Sample | Normalized EGFP/mCherry value (replicate #1) | Normalized EGFP/mCherry value (replicate #2) |
---|---|---|
M059K mCherry:EGFP | 1.772724608, 2.085453242 | 2.600281239, 2.537742473 |
M059K mCherry:EGFP + drug | 1.948901491, 3.044622474 | 3.487826161, 2.579098259 |
M059J mCherry:EGFP | 2.092658688, 4.11618439 | 1.651441549, 2.700436438 |
M059K mCherry:damaged EGFP | 0.207545736, 0.240272044 | 0.133947935, 0.214451077 |
M059K mCherry:damaged EGFP + drug | 0.084415562, 0.074686032 | 0.208750497, 0.175961141 |
M059J mCherry:damaged EGFP | 0.026551063, 0.011684889 | 0.015829439, 0.04141871 |
WF section
WF Red Team: (insert condition information here - enzymes and drug used)
Sample | Normalized EGFP/mCherry value (replicate #1) | Normalized EGFP/mCherry value (replicate #2) |
---|---|---|
M059K mCherry:EGFP | ||
M059K mCherry:EGFP + drug | ||
M059J mCherry:EGFP | ||
M059K mCherry:damaged EGFP | ||
M059K mCherry:damaged EGFP + drug | ||
M059J mCherry:damaged EGFP |
WF Orange Team: ECORI + BglII - Loperamide
Sample | Normalized EGFP/mCherry value (replicate #1) | Normalized EGFP/mCherry value (replicate #2) |
---|---|---|
M059K mCherry:EGFP | 2.25, 2.36 | 2.42, 2.27 |
M059K mCherry:EGFP + drug | 2.09, 2.22 | 1.76, 2.22 |
M059J mCherry:EGFP | 2.85, 3.34 | 2.56, 3.02 |
M059K mCherry:damaged EGFP | 0.10, 0.09 | 0.15, 0.20 |
M059K mCherry:damaged EGFP + drug | 0.13, 0.11 | 0.09, 0.11 |
M059J mCherry:damaged EGFP | 0.01, 0.00 | 0.08, 0.04 |
WF Blue Team: (PmeI Loperamide)
Sample | Normalized EGFP/mCherry value (replicate #1) | Normalized EGFP/mCherry value (replicate #2) |
---|---|---|
M059K mCherry:EGFP | 3.02, 2.25 | 2.43, 2.34 |
M059K mCherry:EGFP + drug | 2.88, 2.07 | 3.05, 2.20 |
M059J mCherry:EGFP | 2.06, 3.1 | 1.75,2.12 |
M059K mCherry:damaged EGFP | 0.254, 0.241 | 0.19, 0.33 |
M059K mCherry:damaged EGFP + drug | 0.12, 0.31 | 0.16, 0.29 |
M059J mCherry:damaged EGFP | 0.05, 0.02 | 0, 0 |
WF Pink Team: (PstI & BglII, Loperamide)
Sample | Normalized EGFP/mCherry value (replicate #1) | Normalized EGFP/mCherry value (replicate #2) |
---|---|---|
M059K mCherry:EGFP | 0.06, 0.05 | 0.05, 0.06 |
M059K mCherry:EGFP + drug | 0.03, 0.03 | 0.02, 0.03 |
M059J mCherry:EGFP | 0.01, 0.01 | 0.01, 0.00 |
M059K mCherry:damaged EGFP | ||
M059K mCherry:damaged EGFP + drug | ||
M059J mCherry:damaged EGFP |
WF Purple Team: (insert condition information here - enzymes and drug used)
Sample | Normalized EGFP/mCherry value (replicate #1) | Normalized EGFP/mCherry value (replicate #2) |
---|---|---|
M059K mCherry:EGFP | 7.6 | |
M059K mCherry:EGFP + drug | 8.4 | |
M059J mCherry:EGFP | 0 | |
M059K mCherry:damaged EGFP | 8.2 | |
M059K mCherry:damaged EGFP + drug | 1.1 | |
M059J mCherry:damaged EGFP | 0 |