http://measurebiology.org/w/api.php?action=feedcontributions&user=Prerna+Bhargava&feedformat=atomCourse Wiki - User contributions [en]2024-03-29T12:50:03ZUser contributionsMediaWiki 1.22.3http://measurebiology.org/wiki/20.109(S22):Communication20.109(S22):Communication2022-03-22T18:51:46Z<p>Prerna Bhargava: /* Workshop Slides and Recordings */</p>
<hr />
<div><div style="padding: 10px; width: 820px; border: 5px solid #434a43;"><br />
{{Template:20.109(S22)}}<br />
<br />
<br />
<br />
==BE Communication Lab==<br />
<br />
Throughout the semester you will participate in workshops provided by an Instructor from the BE Communication Lab, Dr. Prerna Bhargava <bhargavp@mit.edu> or Dr. Sean Clarke <saclarke@mit.edu>. These workshops will help you prepare your major communication assignments. The resources provided at these workshops will be posted below.<br />
<br />
To schedule an appointment for help from a BE Communication Fellow:<br />
*[http://mitcommlab.mit.edu/be/ BE Communication Lab]<br />
<br />
For assistance finding research articles, managing citations, etc.<br />
*[mailto:hsilver@mit.edu Howard Silver], the MIT Library's biological engineering expert<br />
*[http://libguides.mit.edu/bioleng MIT Libraries Biological Engineering Research Guide]<br />
<br />
==Workshop Slides and Recordings==<br />
<br />
<br />
*Figures<br />
** [[Media:20.109 F22 Figures workshop.pdf| Slides]]<br />
*Figure Captions & Titles: <br />
** [[Media:20.109 S22 Captions and Titles workshop.pdf | Slides]]<br />
*Abstracts:<br />
** [[Media:20.109 S22 Abstracts Workshop.pdf| Slides]]<br />
*Journal Club & Oral Presentations:<br />
** [[Media:Journal_Club_Workshop_S22.pdf| Slides]]<br />
*Research Article structure & writing process:<br />
** [ Slides]<br />
** [ Editing checklist]<br />
*Research Proposals:<br />
** [ Slides]<br />
<br />
==Additional resources==<br />
<br />
===Tips from Prof. Jen Heemstra===<br />
<br />
*[https://thingsthatchangethewayithink.blogspot.com/2018/07/research-ideas-part-1-its-not-magic.html Part 1: It’s not magic (go for quantity of ideas)]<br />
*[https://thingsthatchangethewayithink.blogspot.com/2018/08/research-ideas-part-2-this-could-get.html Part 2: This could get ugly (defer judgment)]<br />
*[https://thingsthatchangethewayithink.blogspot.com/2018/09/research-ideas-part-3-ask-questions.html Part 3: Ask questions (be curious)]<br />
<br />
===Ideas for brainstorming===<br />
<br />
*[http://www.designkit.org/methods/28 IDEO's brainstorm rules, full list]<br />
*[https://www.fastcompany.com/3027722/how-the-post-it-note-could-become-the-latest-innovation-technology Post-its for innovation]<br />
*[https://twitter.com/SeaIceBeth/status/1053391424853565442 One professor's method of Post-its for research ideas]<br />
<br />
===Examples from NIH===<br />
<br />
*[https://grants.nih.gov/grants/funding/r03.htm NIH R03 grants info and examples]<br />
*[https://www.niaid.nih.gov/grants-contracts/sample-applications#r03 NIAID info and examples]</div>Prerna Bhargavahttp://measurebiology.org/wiki/File:Journal_Club_Workshop_S22.pdfFile:Journal Club Workshop S22.pdf2022-03-22T18:50:22Z<p>Prerna Bhargava: </p>
<hr />
<div></div>Prerna Bhargavahttp://measurebiology.org/wiki/20.109(S22):Communication20.109(S22):Communication2022-03-22T18:49:18Z<p>Prerna Bhargava: /* Workshop Slides and Recordings */</p>
<hr />
<div><div style="padding: 10px; width: 820px; border: 5px solid #434a43;"><br />
{{Template:20.109(S22)}}<br />
<br />
<br />
<br />
==BE Communication Lab==<br />
<br />
Throughout the semester you will participate in workshops provided by an Instructor from the BE Communication Lab, Dr. Prerna Bhargava <bhargavp@mit.edu> or Dr. Sean Clarke <saclarke@mit.edu>. These workshops will help you prepare your major communication assignments. The resources provided at these workshops will be posted below.<br />
<br />
To schedule an appointment for help from a BE Communication Fellow:<br />
*[http://mitcommlab.mit.edu/be/ BE Communication Lab]<br />
<br />
For assistance finding research articles, managing citations, etc.<br />
*[mailto:hsilver@mit.edu Howard Silver], the MIT Library's biological engineering expert<br />
*[http://libguides.mit.edu/bioleng MIT Libraries Biological Engineering Research Guide]<br />
<br />
==Workshop Slides and Recordings==<br />
<br />
<br />
*Figures<br />
** [[Media:20.109 F22 Figures workshop.pdf| Slides]]<br />
*Figure Captions & Titles: <br />
** [[Media:20.109 S22 Captions and Titles workshop.pdf | Slides]]<br />
*Abstracts:<br />
** [[Media:20.109 S22 Abstracts Workshop.pdf| Slides]]<br />
*Journal Club & Oral Presentations:<br />
** [[Media:https://www.dropbox.com/s/nmpvh3tzrt6ss2s/20.109%20S22%20Journal%20Club%20workshop.pdf?dl=0| Slides]]<br />
*Research Article structure & writing process:<br />
** [ Slides]<br />
** [ Editing checklist]<br />
*Research Proposals:<br />
** [ Slides]<br />
<br />
==Additional resources==<br />
<br />
===Tips from Prof. Jen Heemstra===<br />
<br />
*[https://thingsthatchangethewayithink.blogspot.com/2018/07/research-ideas-part-1-its-not-magic.html Part 1: It’s not magic (go for quantity of ideas)]<br />
*[https://thingsthatchangethewayithink.blogspot.com/2018/08/research-ideas-part-2-this-could-get.html Part 2: This could get ugly (defer judgment)]<br />
*[https://thingsthatchangethewayithink.blogspot.com/2018/09/research-ideas-part-3-ask-questions.html Part 3: Ask questions (be curious)]<br />
<br />
===Ideas for brainstorming===<br />
<br />
*[http://www.designkit.org/methods/28 IDEO's brainstorm rules, full list]<br />
*[https://www.fastcompany.com/3027722/how-the-post-it-note-could-become-the-latest-innovation-technology Post-its for innovation]<br />
*[https://twitter.com/SeaIceBeth/status/1053391424853565442 One professor's method of Post-its for research ideas]<br />
<br />
===Examples from NIH===<br />
<br />
*[https://grants.nih.gov/grants/funding/r03.htm NIH R03 grants info and examples]<br />
*[https://www.niaid.nih.gov/grants-contracts/sample-applications#r03 NIAID info and examples]</div>Prerna Bhargavahttp://measurebiology.org/wiki/20.109(S22):Communication20.109(S22):Communication2022-03-22T18:47:30Z<p>Prerna Bhargava: /* Workshop Slides and Recordings */</p>
<hr />
<div><div style="padding: 10px; width: 820px; border: 5px solid #434a43;"><br />
{{Template:20.109(S22)}}<br />
<br />
<br />
<br />
==BE Communication Lab==<br />
<br />
Throughout the semester you will participate in workshops provided by an Instructor from the BE Communication Lab, Dr. Prerna Bhargava <bhargavp@mit.edu> or Dr. Sean Clarke <saclarke@mit.edu>. These workshops will help you prepare your major communication assignments. The resources provided at these workshops will be posted below.<br />
<br />
To schedule an appointment for help from a BE Communication Fellow:<br />
*[http://mitcommlab.mit.edu/be/ BE Communication Lab]<br />
<br />
For assistance finding research articles, managing citations, etc.<br />
*[mailto:hsilver@mit.edu Howard Silver], the MIT Library's biological engineering expert<br />
*[http://libguides.mit.edu/bioleng MIT Libraries Biological Engineering Research Guide]<br />
<br />
==Workshop Slides and Recordings==<br />
<br />
<br />
*Figures<br />
** [[Media:20.109 F22 Figures workshop.pdf| Slides]]<br />
*Figure Captions & Titles: <br />
** [[Media:20.109 S22 Captions and Titles workshop.pdf | Slides]]<br />
*Abstracts:<br />
** [[Media:20.109 S22 Abstracts Workshop.pdf| Slides]]<br />
*Journal Club & Oral Presentations:<br />
** [ [[Media:https://www.dropbox.com/s/nmpvh3tzrt6ss2s/20.109%20S22%20Journal%20Club%20workshop.pdf?dl=0]]Slides]<br />
*Research Article structure & writing process:<br />
** [ Slides]<br />
** [ Editing checklist]<br />
*Research Proposals:<br />
** [ Slides]<br />
<br />
==Additional resources==<br />
<br />
===Tips from Prof. Jen Heemstra===<br />
<br />
*[https://thingsthatchangethewayithink.blogspot.com/2018/07/research-ideas-part-1-its-not-magic.html Part 1: It’s not magic (go for quantity of ideas)]<br />
*[https://thingsthatchangethewayithink.blogspot.com/2018/08/research-ideas-part-2-this-could-get.html Part 2: This could get ugly (defer judgment)]<br />
*[https://thingsthatchangethewayithink.blogspot.com/2018/09/research-ideas-part-3-ask-questions.html Part 3: Ask questions (be curious)]<br />
<br />
===Ideas for brainstorming===<br />
<br />
*[http://www.designkit.org/methods/28 IDEO's brainstorm rules, full list]<br />
*[https://www.fastcompany.com/3027722/how-the-post-it-note-could-become-the-latest-innovation-technology Post-its for innovation]<br />
*[https://twitter.com/SeaIceBeth/status/1053391424853565442 One professor's method of Post-its for research ideas]<br />
<br />
===Examples from NIH===<br />
<br />
*[https://grants.nih.gov/grants/funding/r03.htm NIH R03 grants info and examples]<br />
*[https://www.niaid.nih.gov/grants-contracts/sample-applications#r03 NIAID info and examples]</div>Prerna Bhargavahttp://measurebiology.org/wiki/20.109(F21):Communication20.109(F21):Communication2021-12-01T11:20:51Z<p>Prerna Bhargava: /* Workshop Slides and Recordings */</p>
<hr />
<div><div style="padding: 10px; width: 820px; border: 5px solid #909497;"><br />
{{Template:20.109(F21)}}<br />
<br />
<br />
<br />
==BE Communication Lab==<br />
<br />
Throughout the semester you will participate in workshops provided by an Instructor from the BE Communication Lab, Dr. Prerna Bhargava <bhargavp@mit.edu> or Dr. Sean Clarke <saclarke@mit.edu>. These workshops will help you prepare your major communication assignments. The resources provided at these workshops will be posted below.<br />
<br />
To schedule an appointment for help from a BE Communication Fellow:<br />
*[http://mitcommlab.mit.edu/be/ BE Communication Lab]<br />
<br />
For assistance finding research articles, managing citations, etc.<br />
*[mailto:hsilver@mit.edu Howard Silver], the MIT Library's biological engineering expert<br />
*[http://libguides.mit.edu/bioleng MIT Libraries Biological Engineering Research Guide]<br />
<br />
==Workshop Slides and Recordings==<br />
<br />
<br />
*Figures<br />
**[https://www.dropbox.com/s/7k23jl5u6mwzrxg/20.109%20F21%20Figures%20workshop.pdf?dl=0 Slides] <br />
**[https://www.dropbox.com/s/jp6vzyosrd3snb1/2020S%2020.109%20Figure%20Design%20Tip%20Sheet.pdf?dl=0 Figures tip sheet]<br><br />
*Figure Captions & Titles: <br />
**[https://www.dropbox.com/s/kemoin99czw4odv/20.109%20F21%20Captions%20and%20Titles%20workshop.pdf?dl=0 Slides]<br />
*Abstracts:<br />
**[https://www.dropbox.com/s/xolxx08c3dhrieo/20.109%20F21%20Abstracts%20and%20Titles%20Workshop.pdf?dl=0 Slides]<br />
*Journal Club & Oral Presentations:<br />
** [https://www.dropbox.com/s/a6a56mmqk2a1jpr/20.109%20F21%20Journal%20Club%20workshop.pdf?dl=0 Slides]<br />
*Research Article structure & writing process:<br />
** [https://www.dropbox.com/s/7okm468b0xb8nt2/20.109%20F21%20Research%20Article%20workshop.pdf?dl=0 Slides]<br />
** [https://mitcommlab.mit.edu/be/2020/08/11/editing-checklist/ editing checklist]<br />
*Research Proposals:<br />
** [https://www.dropbox.com/s/wsv915p1q5mjrde/20.109%20F21%20Research%20Proposal%20workshop.pdf?dl=0 Slides]<br />
<br />
==Additional resources==<br />
<br />
===Tips from Prof. Jen Heemstra===<br />
<br />
*[https://thingsthatchangethewayithink.blogspot.com/2018/07/research-ideas-part-1-its-not-magic.html Part 1: It’s not magic (go for quantity of ideas)]<br />
*[https://thingsthatchangethewayithink.blogspot.com/2018/08/research-ideas-part-2-this-could-get.html Part 2: This could get ugly (defer judgment)]<br />
*[https://thingsthatchangethewayithink.blogspot.com/2018/09/research-ideas-part-3-ask-questions.html Part 3: Ask questions (be curious)]<br />
<br />
===Ideas for brainstorming===<br />
<br />
*[http://www.designkit.org/methods/28 IDEO's brainstorm rules, full list]<br />
*[https://www.fastcompany.com/3027722/how-the-post-it-note-could-become-the-latest-innovation-technology Post-its for innovation]<br />
*[https://twitter.com/SeaIceBeth/status/1053391424853565442 One professor's method of Post-its for research ideas]<br />
<br />
===Examples from NIH===<br />
<br />
*[https://grants.nih.gov/grants/funding/r03.htm NIH R03 grants info and examples]<br />
*[https://www.niaid.nih.gov/grants-contracts/sample-applications#r03 NIAID info and examples]</div>Prerna Bhargavahttp://measurebiology.org/wiki/20.109(F21):Communication20.109(F21):Communication2021-11-17T01:09:22Z<p>Prerna Bhargava: /* Workshop Slides and Recordings */</p>
<hr />
<div><div style="padding: 10px; width: 820px; border: 5px solid #909497;"><br />
{{Template:20.109(F21)}}<br />
<br />
<br />
<br />
==BE Communication Lab==<br />
<br />
Throughout the semester you will participate in workshops provided by an Instructor from the BE Communication Lab, Dr. Prerna Bhargava <bhargavp@mit.edu> or Dr. Sean Clarke <saclarke@mit.edu>. These workshops will help you prepare your major communication assignments. The resources provided at these workshops will be posted below.<br />
<br />
To schedule an appointment for help from a BE Communication Fellow:<br />
*[http://mitcommlab.mit.edu/be/ BE Communication Lab]<br />
<br />
For assistance finding research articles, managing citations, etc.<br />
*[mailto:hsilver@mit.edu Howard Silver], the MIT Library's biological engineering expert<br />
*[http://libguides.mit.edu/bioleng MIT Libraries Biological Engineering Research Guide]<br />
<br />
==Workshop Slides and Recordings==<br />
<br />
<br />
*Figures<br />
**[https://www.dropbox.com/s/7k23jl5u6mwzrxg/20.109%20F21%20Figures%20workshop.pdf?dl=0 Slides] <br />
**[https://www.dropbox.com/s/jp6vzyosrd3snb1/2020S%2020.109%20Figure%20Design%20Tip%20Sheet.pdf?dl=0 Figures tip sheet]<br><br />
*Figure Captions & Titles: <br />
**[https://www.dropbox.com/s/kemoin99czw4odv/20.109%20F21%20Captions%20and%20Titles%20workshop.pdf?dl=0 Slides]<br />
*Abstracts:<br />
**[https://www.dropbox.com/s/xolxx08c3dhrieo/20.109%20F21%20Abstracts%20and%20Titles%20Workshop.pdf?dl=0 Slides]<br />
*Journal Club & Oral Presentations:<br />
** [https://www.dropbox.com/s/a6a56mmqk2a1jpr/20.109%20F21%20Journal%20Club%20workshop.pdf?dl=0 Slides]<br />
*Research Article structure & writing process:<br />
** [https://www.dropbox.com/s/7okm468b0xb8nt2/20.109%20F21%20Research%20Article%20workshop.pdf?dl=0 Slides]<br />
** [https://mitcommlab.mit.edu/be/2020/08/11/editing-checklist/ editing checklist]<br />
*Research Proposals:<br />
** [ Slides]<br />
<br />
==Additional resources==<br />
<br />
===Tips from Prof. Jen Heemstra===<br />
<br />
*[https://thingsthatchangethewayithink.blogspot.com/2018/07/research-ideas-part-1-its-not-magic.html Part 1: It’s not magic (go for quantity of ideas)]<br />
*[https://thingsthatchangethewayithink.blogspot.com/2018/08/research-ideas-part-2-this-could-get.html Part 2: This could get ugly (defer judgment)]<br />
*[https://thingsthatchangethewayithink.blogspot.com/2018/09/research-ideas-part-3-ask-questions.html Part 3: Ask questions (be curious)]<br />
<br />
===Ideas for brainstorming===<br />
<br />
*[http://www.designkit.org/methods/28 IDEO's brainstorm rules, full list]<br />
*[https://www.fastcompany.com/3027722/how-the-post-it-note-could-become-the-latest-innovation-technology Post-its for innovation]<br />
*[https://twitter.com/SeaIceBeth/status/1053391424853565442 One professor's method of Post-its for research ideas]<br />
<br />
===Examples from NIH===<br />
<br />
*[https://grants.nih.gov/grants/funding/r03.htm NIH R03 grants info and examples]<br />
*[https://www.niaid.nih.gov/grants-contracts/sample-applications#r03 NIAID info and examples]</div>Prerna Bhargavahttp://measurebiology.org/wiki/20.109(F21):Communication20.109(F21):Communication2021-09-30T18:47:32Z<p>Prerna Bhargava: /* Workshop Slides and Recordings */</p>
<hr />
<div><div style="padding: 10px; width: 820px; border: 5px solid #909497;"><br />
{{Template:20.109(F21)}}<br />
<br />
<br />
<br />
==BE Communication Lab==<br />
<br />
Throughout the semester you will participate in workshops provided by an Instructor from the BE Communication Lab, Dr. Prerna Bhargava (bhargavp@mit.edu). These workshops will help you prepare your major communication assignments. The resources provided at these workshops will be posted below.<br />
<br />
To schedule an appointment for help from a BE Communication Fellow:<br />
*[http://mitcommlab.mit.edu/be/ BE Communication Lab]<br />
<br />
For assistance finding research articles, managing citations, etc.<br />
*[mailto:hsilver@mit.edu Howard Silver], the MIT Library's biological engineering expert<br />
*[http://libguides.mit.edu/bioleng MIT Libraries Biological Engineering Research Guide]<br />
<br />
==Workshop Slides and Recordings==<br />
<br />
<br />
*Figures<br />
**[https://www.dropbox.com/s/7k23jl5u6mwzrxg/20.109%20F21%20Figures%20workshop.pdf?dl=0 Slides] <br />
**[https://www.dropbox.com/s/jp6vzyosrd3snb1/2020S%2020.109%20Figure%20Design%20Tip%20Sheet.pdf?dl=0 Figures tip sheet]<br><br />
*Figure Captions & Titles: <br />
**[https://www.dropbox.com/s/kemoin99czw4odv/20.109%20F21%20Captions%20and%20Titles%20workshop.pdf?dl=0 Slides]<br />
*Abstracts:<br />
**[https://www.dropbox.com/s/xolxx08c3dhrieo/20.109%20F21%20Abstracts%20and%20Titles%20Workshop.pdf?dl=0 Slides]<br />
*Journal Club & Oral Presentations:<br />
** [ Slides]<br />
*Research Article structure & writing process:<br />
** [ Slides]<br />
** [https://mitcommlab.mit.edu/be/2020/08/11/editing-checklist/ editing checklist]<br />
*Research Proposals:<br />
** [ Slides]<br />
<br />
==Additional resources==<br />
<br />
===Tips from Prof. Jen Heemstra===<br />
<br />
*[https://thingsthatchangethewayithink.blogspot.com/2018/07/research-ideas-part-1-its-not-magic.html Part 1: It’s not magic (go for quantity of ideas)]<br />
*[https://thingsthatchangethewayithink.blogspot.com/2018/08/research-ideas-part-2-this-could-get.html Part 2: This could get ugly (defer judgment)]<br />
*[https://thingsthatchangethewayithink.blogspot.com/2018/09/research-ideas-part-3-ask-questions.html Part 3: Ask questions (be curious)]<br />
<br />
===Ideas for brainstorming===<br />
<br />
*[http://www.designkit.org/methods/28 IDEO's brainstorm rules, full list]<br />
*[https://www.fastcompany.com/3027722/how-the-post-it-note-could-become-the-latest-innovation-technology Post-its for innovation]<br />
*[https://twitter.com/SeaIceBeth/status/1053391424853565442 One professor's method of Post-its for research ideas]<br />
<br />
===Examples from NIH===<br />
<br />
*[https://grants.nih.gov/grants/funding/r03.htm NIH R03 grants info and examples]<br />
*[https://www.niaid.nih.gov/grants-contracts/sample-applications#r03 NIAID info and examples]</div>Prerna Bhargavahttp://measurebiology.org/wiki/20.109(F21):Communication20.109(F21):Communication2021-09-28T18:15:54Z<p>Prerna Bhargava: /* Workshop Slides and Recordings */</p>
<hr />
<div><div style="padding: 10px; width: 820px; border: 5px solid #909497;"><br />
{{Template:20.109(F21)}}<br />
<br />
<br />
<br />
==BE Communication Lab==<br />
<br />
Throughout the semester you will participate in workshops provided by an Instructor from the BE Communication Lab, Dr. Prerna Bhargava (bhargavp@mit.edu). These workshops will help you prepare your major communication assignments. The resources provided at these workshops will be posted below.<br />
<br />
To schedule an appointment for help from a BE Communication Fellow:<br />
*[http://mitcommlab.mit.edu/be/ BE Communication Lab]<br />
<br />
For assistance finding research articles, managing citations, etc.<br />
*[mailto:hsilver@mit.edu Howard Silver], the MIT Library's biological engineering expert<br />
*[http://libguides.mit.edu/bioleng MIT Libraries Biological Engineering Research Guide]<br />
<br />
==Workshop Slides and Recordings==<br />
<br />
<br />
*Figures<br />
**[https://www.dropbox.com/s/7k23jl5u6mwzrxg/20.109%20F21%20Figures%20workshop.pdf?dl=0 Slides] <br />
**[https://www.dropbox.com/s/jp6vzyosrd3snb1/2020S%2020.109%20Figure%20Design%20Tip%20Sheet.pdf?dl=0 Figures tip sheet]<br><br />
*Figure Captions & Titles: <br />
**[https://www.dropbox.com/s/kemoin99czw4odv/20.109%20F21%20Captions%20and%20Titles%20workshop.pdf?dl=0 Slides]<br />
*Abstracts:<br />
**[ Slides]<br />
*Journal Club & Oral Presentations:<br />
** [ Slides]<br />
*Research Article structure & writing process:<br />
** [ Slides]<br />
** [https://mitcommlab.mit.edu/be/2020/08/11/editing-checklist/ editing checklist]<br />
*Research Proposals:<br />
** [ Slides]<br />
<br />
==Additional resources==<br />
<br />
===Tips from Prof. Jen Heemstra===<br />
<br />
*[https://thingsthatchangethewayithink.blogspot.com/2018/07/research-ideas-part-1-its-not-magic.html Part 1: It’s not magic (go for quantity of ideas)]<br />
*[https://thingsthatchangethewayithink.blogspot.com/2018/08/research-ideas-part-2-this-could-get.html Part 2: This could get ugly (defer judgment)]<br />
*[https://thingsthatchangethewayithink.blogspot.com/2018/09/research-ideas-part-3-ask-questions.html Part 3: Ask questions (be curious)]<br />
<br />
===Ideas for brainstorming===<br />
<br />
*[http://www.designkit.org/methods/28 IDEO's brainstorm rules, full list]<br />
*[https://www.fastcompany.com/3027722/how-the-post-it-note-could-become-the-latest-innovation-technology Post-its for innovation]<br />
*[https://twitter.com/SeaIceBeth/status/1053391424853565442 One professor's method of Post-its for research ideas]<br />
<br />
===Examples from NIH===<br />
<br />
*[https://grants.nih.gov/grants/funding/r03.htm NIH R03 grants info and examples]<br />
*[https://www.niaid.nih.gov/grants-contracts/sample-applications#r03 NIAID info and examples]</div>Prerna Bhargavahttp://measurebiology.org/wiki/20.109(F21):Communication20.109(F21):Communication2021-09-21T18:59:16Z<p>Prerna Bhargava: /* Workshop Slides and Recordings */</p>
<hr />
<div><div style="padding: 10px; width: 820px; border: 5px solid #909497;"><br />
{{Template:20.109(F21)}}<br />
<br />
<br />
<br />
==BE Communication Lab==<br />
<br />
Throughout the semester you will participate in workshops provided by an Instructor from the BE Communication Lab, Dr. Prerna Bhargava (bhargavp@mit.edu). These workshops will help you prepare your major communication assignments. The resources provided at these workshops will be posted below.<br />
<br />
To schedule an appointment for help from a BE Communication Fellow:<br />
*[http://mitcommlab.mit.edu/be/ BE Communication Lab]<br />
<br />
For assistance finding research articles, managing citations, etc.<br />
*[mailto:hsilver@mit.edu Howard Silver], the MIT Library's biological engineering expert<br />
*[http://libguides.mit.edu/bioleng MIT Libraries Biological Engineering Research Guide]<br />
<br />
==Workshop Slides and Recordings==<br />
<br />
<br />
*Figures<br />
**[https://www.dropbox.com/s/7k23jl5u6mwzrxg/20.109%20F21%20Figures%20workshop.pdf?dl=0 Slides] <br />
**[https://www.dropbox.com/s/jp6vzyosrd3snb1/2020S%2020.109%20Figure%20Design%20Tip%20Sheet.pdf?dl=0 Figures tip sheet]<br><br />
*Figure Captions & Titles: <br />
**[ Slides]<br />
*Titles & Abstracts:<br />
**[ Slides]<br />
*Journal Club & Oral Presentations:<br />
** [ Slides]<br />
*Research Article structure & writing process:<br />
** [ Slides]<br />
** [https://mitcommlab.mit.edu/be/2020/08/11/editing-checklist/ editing checklist]<br />
*Research Proposals:<br />
** [ Slides]<br />
<br />
==Additional resources==<br />
<br />
===Tips from Prof. Jen Heemstra===<br />
<br />
*[https://thingsthatchangethewayithink.blogspot.com/2018/07/research-ideas-part-1-its-not-magic.html Part 1: It’s not magic (go for quantity of ideas)]<br />
*[https://thingsthatchangethewayithink.blogspot.com/2018/08/research-ideas-part-2-this-could-get.html Part 2: This could get ugly (defer judgment)]<br />
*[https://thingsthatchangethewayithink.blogspot.com/2018/09/research-ideas-part-3-ask-questions.html Part 3: Ask questions (be curious)]<br />
<br />
===Ideas for brainstorming===<br />
<br />
*[http://www.designkit.org/methods/28 IDEO's brainstorm rules, full list]<br />
*[https://www.fastcompany.com/3027722/how-the-post-it-note-could-become-the-latest-innovation-technology Post-its for innovation]<br />
*[https://twitter.com/SeaIceBeth/status/1053391424853565442 One professor's method of Post-its for research ideas]<br />
<br />
===Examples from NIH===<br />
<br />
*[https://grants.nih.gov/grants/funding/r03.htm NIH R03 grants info and examples]<br />
*[https://www.niaid.nih.gov/grants-contracts/sample-applications#r03 NIAID info and examples]</div>Prerna Bhargavahttp://measurebiology.org/wiki/20.109(S21):Communication20.109(S21):Communication2021-05-05T18:23:31Z<p>Prerna Bhargava: /* Workshop Slides and Recordings */</p>
<hr />
<div><div style="padding: 10px; width: 820px; border: 5px solid #1e0c9f;"><br />
{{Template:20.109(S21)}}<br />
<br />
<br />
<br />
==BE Communication Lab information==<br />
<br />
Throughout the semester you will participate in workshops provided by the Instructors from the BE Communication Lab, Dr. Sean Clarke (saclarke@mit.edu) and Dr. Prerna Bhargava (bhargavp@mit.edu). These workshops will help you prepare your major communication assignments. The resources provided at these workshops will be posted below.<br />
<br />
To schedule an appointment for help from a BE Communication Fellow:<br />
*[http://mitcommlab.mit.edu/be/ BE Communication Lab]<br />
<br />
For assistance finding research articles, managing citations, etc.<br />
*[mailto:hsilver@mit.edu Howard Silver], the MIT Library's biological engineering expert<br />
*[http://libguides.mit.edu/bioleng MIT Libraries Biological Engineering Research Guide]<br />
<br />
==Workshop Slides and Recordings==<br />
<br />
*Titles & Abstracts:<br />
** [https://www.dropbox.com/s/s3p6qxqkydcd5ek/20.109%20S21%20Abstracts%20and%20Titles%20Workshop.pdf?dl=0 slides]<br />
** [https://mit.zoom.us/rec/play/fnA7spIacZbb12XZO6y2CGZI0AmKxMkQA3KA5admOCs7CaBxVQY729urLD4C5wDFJIA18B9sf4Hw_2IJ.3puQgjhgfmFFvx_3?continueMode=true video]<br />
*Figures & Captions:<br />
** [https://www.dropbox.com/s/0nnli96x0dd3f8b/20.109%20S21%20Figures%20workshop.pdf?dl=0 Slides] and [https://www.dropbox.com/s/jp6vzyosrd3snb1/2020S%2020.109%20Figure%20Design%20Tip%20Sheet.pdf?dl=0 Figures tip sheet]<br><br />
** [https://mit.zoom.us/rec/play/iNBo6YwegZ5PY9dtgGn74ssQ73D54xsucZtZ0tEDlTQR0RrmxChsEYfD3TZsZzairhUqn3sEcdzAva6G.MYLsBhN3mY6L7mTE?continueMode=true video]<br />
*Journal Club & Oral Presentations:<br />
** [https://www.dropbox.com/s/tbf4s41k5kz2jr5/20.109%20S21%20Journal%20Club%20workshop.pdf?dl=0 slides]<br />
** [https://mit.zoom.us/rec/play/JW3RBwlRrszoSrH8KsO4nfSr3Q8nPk8mnH8BpsGjkQF9rHxG8KZ30rdZ3GO9HxyYjrd95_MokQARWlx4.qY6T7_bqPIy3u6YP?continueMode=true video]<br />
*Research Article structure & writing process:<br />
** [https://www.dropbox.com/s/vztwf2h1naxftxk/20.109%20S21%20Research%20Article%20workshop.pdf?dl=0 slides]<br />
** [https://mitcommlab.mit.edu/be/2020/08/11/editing-checklist/ editing checklist]<br />
** [https://mit.zoom.us/rec/play/CmK62UwrJ6XxjDxgelEOlAOoTYzitoZJax1fjq-tl5uqUs5uNTBJMQpHs9-c9hPmnT2bXko1p2V5Wgdc.QA6_1DxvSS1ZYCtJ?continueMode=true video]<br />
*Research Proposals:<br />
** [https://www.dropbox.com/s/tbwr5jub327h593/20.109%20S21%20Research%20Proposal%20workshop.pdf?dl=0 slides]<br />
** [https://mit.zoom.us/rec/share/kKtyf6OTBtNJMsIzgD9-n4ui0at9zNmvwI7r1erNG0EDsg3K2W7jLvjVMVctpDA.6ZmeAMeM_vzS8NKM video]<br />
<br />
==Additional resources==<br />
<br />
===Tips from Prof. Jen Heemstra===<br />
<br />
*[https://thingsthatchangethewayithink.blogspot.com/2018/07/research-ideas-part-1-its-not-magic.html Part 1: It’s not magic (go for quantity of ideas)]<br />
*[https://thingsthatchangethewayithink.blogspot.com/2018/08/research-ideas-part-2-this-could-get.html Part 2: This could get ugly (defer judgment)]<br />
*[https://thingsthatchangethewayithink.blogspot.com/2018/09/research-ideas-part-3-ask-questions.html Part 3: Ask questions (be curious)]<br />
<br />
===Ideas for brainstorming===<br />
<br />
*[http://www.designkit.org/methods/28 IDEO's brainstorm rules, full list]<br />
*[https://www.fastcompany.com/3027722/how-the-post-it-note-could-become-the-latest-innovation-technology Post-its for innovation]<br />
*[https://twitter.com/SeaIceBeth/status/1053391424853565442 One professor's method of Post-its for research ideas]<br />
<br />
===Examples from NIH===<br />
<br />
*[https://grants.nih.gov/grants/funding/r03.htm NIH R03 grants info and examples]<br />
*[https://www.niaid.nih.gov/grants-contracts/sample-applications#r03 NIAID info and examples]</div>Prerna Bhargavahttp://measurebiology.org/wiki/20.109(S21):Communication20.109(S21):Communication2021-04-13T18:02:01Z<p>Prerna Bhargava: /* Workshop Slides and Recordings */</p>
<hr />
<div><div style="padding: 10px; width: 820px; border: 5px solid #1e0c9f;"><br />
{{Template:20.109(S21)}}<br />
<br />
<br />
<br />
==BE Communication Lab information==<br />
<br />
Throughout the semester you will participate in workshops provided by the Instructors from the BE Communication Lab, Dr. Sean Clarke (saclarke@mit.edu) and Dr. Prerna Bhargava (bhargavp@mit.edu). These workshops will help you prepare your major communication assignments. The resources provided at these workshops will be posted below.<br />
<br />
To schedule an appointment for help from a BE Communication Fellow:<br />
*[http://mitcommlab.mit.edu/be/ BE Communication Lab]<br />
<br />
For assistance finding research articles, managing citations, etc.<br />
*[mailto:hsilver@mit.edu Howard Silver], the MIT Library's biological engineering expert<br />
*[http://libguides.mit.edu/bioleng MIT Libraries Biological Engineering Research Guide]<br />
<br />
==Workshop Slides and Recordings==<br />
<br />
*Titles & Abstracts:<br />
** [https://www.dropbox.com/s/s3p6qxqkydcd5ek/20.109%20S21%20Abstracts%20and%20Titles%20Workshop.pdf?dl=0 slides]<br />
** [https://mit.zoom.us/rec/play/fnA7spIacZbb12XZO6y2CGZI0AmKxMkQA3KA5admOCs7CaBxVQY729urLD4C5wDFJIA18B9sf4Hw_2IJ.3puQgjhgfmFFvx_3?continueMode=true video]<br />
*Figures & Captions:<br />
** [https://www.dropbox.com/s/0nnli96x0dd3f8b/20.109%20S21%20Figures%20workshop.pdf?dl=0 Slides] and [https://www.dropbox.com/s/jp6vzyosrd3snb1/2020S%2020.109%20Figure%20Design%20Tip%20Sheet.pdf?dl=0 Figures tip sheet]<br><br />
** [https://mit.zoom.us/rec/play/iNBo6YwegZ5PY9dtgGn74ssQ73D54xsucZtZ0tEDlTQR0RrmxChsEYfD3TZsZzairhUqn3sEcdzAva6G.MYLsBhN3mY6L7mTE?continueMode=true video]<br />
*Journal Club & Oral Presentations:<br />
** [https://www.dropbox.com/s/tbf4s41k5kz2jr5/20.109%20S21%20Journal%20Club%20workshop.pdf?dl=0 slides]<br />
** [https://mit.zoom.us/rec/play/JW3RBwlRrszoSrH8KsO4nfSr3Q8nPk8mnH8BpsGjkQF9rHxG8KZ30rdZ3GO9HxyYjrd95_MokQARWlx4.qY6T7_bqPIy3u6YP?continueMode=true video]<br />
*Research Article structure & writing process:<br />
** [https://www.dropbox.com/s/vztwf2h1naxftxk/20.109%20S21%20Research%20Article%20workshop.pdf?dl=0 slides]<br />
** [https://mitcommlab.mit.edu/be/2020/08/11/editing-checklist/ editing checklist]<br />
** [ video]<br />
*Research Proposals:<br />
** [ slides]<br />
** [ video]<br />
<br />
==Additional resources==<br />
<br />
===Tips from Prof. Jen Heemstra===<br />
<br />
*[https://thingsthatchangethewayithink.blogspot.com/2018/07/research-ideas-part-1-its-not-magic.html Part 1: It’s not magic (go for quantity of ideas)]<br />
*[https://thingsthatchangethewayithink.blogspot.com/2018/08/research-ideas-part-2-this-could-get.html Part 2: This could get ugly (defer judgment)]<br />
*[https://thingsthatchangethewayithink.blogspot.com/2018/09/research-ideas-part-3-ask-questions.html Part 3: Ask questions (be curious)]<br />
<br />
===Ideas for brainstorming===<br />
<br />
*[http://www.designkit.org/methods/28 IDEO's brainstorm rules, full list]<br />
*[https://www.fastcompany.com/3027722/how-the-post-it-note-could-become-the-latest-innovation-technology Post-its for innovation]<br />
*[https://twitter.com/SeaIceBeth/status/1053391424853565442 One professor's method of Post-its for research ideas]<br />
<br />
===Examples from NIH===<br />
<br />
*[https://grants.nih.gov/grants/funding/r03.htm NIH R03 grants info and examples]<br />
*[https://www.niaid.nih.gov/grants-contracts/sample-applications#r03 NIAID info and examples]</div>Prerna Bhargavahttp://measurebiology.org/wiki/20.109(S21):Communication20.109(S21):Communication2021-04-13T18:00:50Z<p>Prerna Bhargava: /* Workshop Slides and Recordings */</p>
<hr />
<div><div style="padding: 10px; width: 820px; border: 5px solid #1e0c9f;"><br />
{{Template:20.109(S21)}}<br />
<br />
<br />
<br />
==BE Communication Lab information==<br />
<br />
Throughout the semester you will participate in workshops provided by the Instructors from the BE Communication Lab, Dr. Sean Clarke (saclarke@mit.edu) and Dr. Prerna Bhargava (bhargavp@mit.edu). These workshops will help you prepare your major communication assignments. The resources provided at these workshops will be posted below.<br />
<br />
To schedule an appointment for help from a BE Communication Fellow:<br />
*[http://mitcommlab.mit.edu/be/ BE Communication Lab]<br />
<br />
For assistance finding research articles, managing citations, etc.<br />
*[mailto:hsilver@mit.edu Howard Silver], the MIT Library's biological engineering expert<br />
*[http://libguides.mit.edu/bioleng MIT Libraries Biological Engineering Research Guide]<br />
<br />
==Workshop Slides and Recordings==<br />
<br />
*Titles & Abstracts:<br />
** [https://www.dropbox.com/s/s3p6qxqkydcd5ek/20.109%20S21%20Abstracts%20and%20Titles%20Workshop.pdf?dl=0 slides]<br />
** [https://mit.zoom.us/rec/play/fnA7spIacZbb12XZO6y2CGZI0AmKxMkQA3KA5admOCs7CaBxVQY729urLD4C5wDFJIA18B9sf4Hw_2IJ.3puQgjhgfmFFvx_3?continueMode=true video]<br />
*Figures & Captions:<br />
** [https://www.dropbox.com/s/0nnli96x0dd3f8b/20.109%20S21%20Figures%20workshop.pdf?dl=0 Slides] and [https://www.dropbox.com/s/jp6vzyosrd3snb1/2020S%2020.109%20Figure%20Design%20Tip%20Sheet.pdf?dl=0 Figures tip sheet]<br><br />
** [https://mit.zoom.us/rec/play/iNBo6YwegZ5PY9dtgGn74ssQ73D54xsucZtZ0tEDlTQR0RrmxChsEYfD3TZsZzairhUqn3sEcdzAva6G.MYLsBhN3mY6L7mTE?continueMode=true video]<br />
*Journal Club & Oral Presentations:<br />
** [https://www.dropbox.com/s/tbf4s41k5kz2jr5/20.109%20S21%20Journal%20Club%20workshop.pdf?dl=0 slides]<br />
** [https://mit.zoom.us/rec/play/JW3RBwlRrszoSrH8KsO4nfSr3Q8nPk8mnH8BpsGjkQF9rHxG8KZ30rdZ3GO9HxyYjrd95_MokQARWlx4.qY6T7_bqPIy3u6YP?continueMode=true video]<br />
*Research Article structure & writing process:<br />
** [https://www.dropbox.com/s/vztwf2h1naxftxk/20.109%20S21%20Research%20Article%20workshop.pdf?dl=0 slides]<br />
** [ video]<br />
*Research Proposals:<br />
** [ slides]<br />
** [ video]<br />
<br />
==Additional resources==<br />
<br />
===Tips from Prof. Jen Heemstra===<br />
<br />
*[https://thingsthatchangethewayithink.blogspot.com/2018/07/research-ideas-part-1-its-not-magic.html Part 1: It’s not magic (go for quantity of ideas)]<br />
*[https://thingsthatchangethewayithink.blogspot.com/2018/08/research-ideas-part-2-this-could-get.html Part 2: This could get ugly (defer judgment)]<br />
*[https://thingsthatchangethewayithink.blogspot.com/2018/09/research-ideas-part-3-ask-questions.html Part 3: Ask questions (be curious)]<br />
<br />
===Ideas for brainstorming===<br />
<br />
*[http://www.designkit.org/methods/28 IDEO's brainstorm rules, full list]<br />
*[https://www.fastcompany.com/3027722/how-the-post-it-note-could-become-the-latest-innovation-technology Post-its for innovation]<br />
*[https://twitter.com/SeaIceBeth/status/1053391424853565442 One professor's method of Post-its for research ideas]<br />
<br />
===Examples from NIH===<br />
<br />
*[https://grants.nih.gov/grants/funding/r03.htm NIH R03 grants info and examples]<br />
*[https://www.niaid.nih.gov/grants-contracts/sample-applications#r03 NIAID info and examples]</div>Prerna Bhargavahttp://measurebiology.org/wiki/20.109(S21):Communication20.109(S21):Communication2021-03-31T02:52:32Z<p>Prerna Bhargava: /* Workshop Slides and Recordings */</p>
<hr />
<div><div style="padding: 10px; width: 820px; border: 5px solid #1e0c9f;"><br />
{{Template:20.109(S21)}}<br />
<br />
<br />
<br />
==BE Communication Lab information==<br />
<br />
Throughout the semester you will participate in workshops provided by the Instructors from the BE Communication Lab, Dr. Sean Clarke (saclarke@mit.edu) and Dr. Prerna Bhargava (bhargavp@mit.edu). These workshops will help you prepare your major communication assignments. The resources provided at these workshops will be posted below.<br />
<br />
To schedule an appointment for help from a BE Communication Fellow:<br />
*[http://mitcommlab.mit.edu/be/ BE Communication Lab]<br />
<br />
For assistance finding research articles, managing citations, etc.<br />
*[mailto:hsilver@mit.edu Howard Silver], the MIT Library's biological engineering expert<br />
*[http://libguides.mit.edu/bioleng MIT Libraries Biological Engineering Research Guide]<br />
<br />
==Workshop Slides and Recordings==<br />
<br />
*Titles & Abstracts:<br />
** [https://www.dropbox.com/s/s3p6qxqkydcd5ek/20.109%20S21%20Abstracts%20and%20Titles%20Workshop.pdf?dl=0 slides]<br />
** [https://mit.zoom.us/rec/play/fnA7spIacZbb12XZO6y2CGZI0AmKxMkQA3KA5admOCs7CaBxVQY729urLD4C5wDFJIA18B9sf4Hw_2IJ.3puQgjhgfmFFvx_3?continueMode=true video]<br />
*Figures & Captions:<br />
** [https://www.dropbox.com/s/0nnli96x0dd3f8b/20.109%20S21%20Figures%20workshop.pdf?dl=0 Slides] and [https://www.dropbox.com/s/jp6vzyosrd3snb1/2020S%2020.109%20Figure%20Design%20Tip%20Sheet.pdf?dl=0 Figures tip sheet]<br><br />
** [https://mit.zoom.us/rec/play/iNBo6YwegZ5PY9dtgGn74ssQ73D54xsucZtZ0tEDlTQR0RrmxChsEYfD3TZsZzairhUqn3sEcdzAva6G.MYLsBhN3mY6L7mTE?continueMode=true video]<br />
*Journal Club & Oral Presentations:<br />
** [https://www.dropbox.com/s/tbf4s41k5kz2jr5/20.109%20S21%20Journal%20Club%20workshop.pdf?dl=0 slides]<br />
** [https://mit.zoom.us/rec/play/JW3RBwlRrszoSrH8KsO4nfSr3Q8nPk8mnH8BpsGjkQF9rHxG8KZ30rdZ3GO9HxyYjrd95_MokQARWlx4.qY6T7_bqPIy3u6YP?continueMode=true video]<br />
*Research Article structure & writing process:<br />
** [ slides]<br />
** [ video]<br />
*Research Proposals:<br />
** [ slides]<br />
** [ video]<br />
<br />
==Additional resources==<br />
<br />
===Tips from Prof. Jen Heemstra===<br />
<br />
*[https://thingsthatchangethewayithink.blogspot.com/2018/07/research-ideas-part-1-its-not-magic.html Part 1: It’s not magic (go for quantity of ideas)]<br />
*[https://thingsthatchangethewayithink.blogspot.com/2018/08/research-ideas-part-2-this-could-get.html Part 2: This could get ugly (defer judgment)]<br />
*[https://thingsthatchangethewayithink.blogspot.com/2018/09/research-ideas-part-3-ask-questions.html Part 3: Ask questions (be curious)]<br />
<br />
===Ideas for brainstorming===<br />
<br />
*[http://www.designkit.org/methods/28 IDEO's brainstorm rules, full list]<br />
*[https://www.fastcompany.com/3027722/how-the-post-it-note-could-become-the-latest-innovation-technology Post-its for innovation]<br />
*[https://twitter.com/SeaIceBeth/status/1053391424853565442 One professor's method of Post-its for research ideas]<br />
<br />
===Examples from NIH===<br />
<br />
*[https://grants.nih.gov/grants/funding/r03.htm NIH R03 grants info and examples]<br />
*[https://www.niaid.nih.gov/grants-contracts/sample-applications#r03 NIAID info and examples]</div>Prerna Bhargavahttp://measurebiology.org/wiki/20.109(S21):Communication20.109(S21):Communication2021-03-23T17:30:12Z<p>Prerna Bhargava: /* Workshop Slides and Recordings */</p>
<hr />
<div><div style="padding: 10px; width: 820px; border: 5px solid #1e0c9f;"><br />
{{Template:20.109(S21)}}<br />
<br />
<br />
<br />
==BE Communication Lab information==<br />
<br />
Throughout the semester you will participate in workshops provided by the Instructors from the BE Communication Lab, Dr. Sean Clarke (saclarke@mit.edu) and Dr. Prerna Bhargava (bhargavp@mit.edu). These workshops will help you prepare your major communication assignments. The resources provided at these workshops will be posted below.<br />
<br />
To schedule an appointment for help from a BE Communication Fellow:<br />
*[http://mitcommlab.mit.edu/be/ BE Communication Lab]<br />
<br />
For assistance finding research articles, managing citations, etc.<br />
*[mailto:hsilver@mit.edu Howard Silver], the MIT Library's biological engineering expert<br />
*[http://libguides.mit.edu/bioleng MIT Libraries Biological Engineering Research Guide]<br />
<br />
==Workshop Slides and Recordings==<br />
<br />
*Titles & Abstracts:<br />
** [https://www.dropbox.com/s/s3p6qxqkydcd5ek/20.109%20S21%20Abstracts%20and%20Titles%20Workshop.pdf?dl=0 slides]<br />
** [https://mit.zoom.us/rec/play/fnA7spIacZbb12XZO6y2CGZI0AmKxMkQA3KA5admOCs7CaBxVQY729urLD4C5wDFJIA18B9sf4Hw_2IJ.3puQgjhgfmFFvx_3?continueMode=true video]<br />
*Figures & Captions:<br />
** [https://www.dropbox.com/s/0nnli96x0dd3f8b/20.109%20S21%20Figures%20workshop.pdf?dl=0 Slides] and [https://www.dropbox.com/s/jp6vzyosrd3snb1/2020S%2020.109%20Figure%20Design%20Tip%20Sheet.pdf?dl=0 Figures tip sheet]<br><br />
** [https://mit.zoom.us/rec/play/iNBo6YwegZ5PY9dtgGn74ssQ73D54xsucZtZ0tEDlTQR0RrmxChsEYfD3TZsZzairhUqn3sEcdzAva6G.MYLsBhN3mY6L7mTE?continueMode=true video]<br />
*Journal Club & Oral Presentations:<br />
** [ slides]<br />
** [ video]<br />
*Research Article structure & writing process:<br />
** [ slides]<br />
** [ video]<br />
*Research Proposals:<br />
** [ slides]<br />
** [ video]<br />
<br />
==Additional resources==<br />
<br />
===Tips from Prof. Jen Heemstra===<br />
<br />
*[https://thingsthatchangethewayithink.blogspot.com/2018/07/research-ideas-part-1-its-not-magic.html Part 1: It’s not magic (go for quantity of ideas)]<br />
*[https://thingsthatchangethewayithink.blogspot.com/2018/08/research-ideas-part-2-this-could-get.html Part 2: This could get ugly (defer judgment)]<br />
*[https://thingsthatchangethewayithink.blogspot.com/2018/09/research-ideas-part-3-ask-questions.html Part 3: Ask questions (be curious)]<br />
<br />
===Ideas for brainstorming===<br />
<br />
*[http://www.designkit.org/methods/28 IDEO's brainstorm rules, full list]<br />
*[https://www.fastcompany.com/3027722/how-the-post-it-note-could-become-the-latest-innovation-technology Post-its for innovation]<br />
*[https://twitter.com/SeaIceBeth/status/1053391424853565442 One professor's method of Post-its for research ideas]<br />
<br />
===Examples from NIH===<br />
<br />
*[https://grants.nih.gov/grants/funding/r03.htm NIH R03 grants info and examples]<br />
*[https://www.niaid.nih.gov/grants-contracts/sample-applications#r03 NIAID info and examples]</div>Prerna Bhargavahttp://measurebiology.org/wiki/20.109(S21):Communication20.109(S21):Communication2021-02-26T17:26:19Z<p>Prerna Bhargava: /* Workshop Slides and Recordings */</p>
<hr />
<div><div style="padding: 10px; width: 820px; border: 5px solid #1e0c9f;"><br />
{{Template:20.109(S21)}}<br />
<br />
<br />
<br />
==BE Communication Lab information==<br />
<br />
Throughout the semester you will participate in workshops provided by the Instructors from the BE Communication Lab, Dr. Sean Clarke (saclarke@mit.edu) and Dr. Prerna Bhargava (bhargavp@mit.edu). These workshops will help you prepare your major communication assignments. The resources provided at these workshops will be posted below.<br />
<br />
To schedule an appointment for help from a BE Communication Fellow:<br />
*[http://mitcommlab.mit.edu/be/ BE Communication Lab]<br />
<br />
For assistance finding research articles, managing citations, etc.<br />
*[mailto:hsilver@mit.edu Howard Silver], the MIT Library's biological engineering expert<br />
*[http://libguides.mit.edu/bioleng MIT Libraries Biological Engineering Research Guide]<br />
<br />
==Workshop Slides and Recordings==<br />
<br />
*Titles & Abstracts:<br />
** [ slides]<br />
** [ video]<br />
*Figures & Captions:<br />
** [https://www.dropbox.com/s/0nnli96x0dd3f8b/20.109%20S21%20Figures%20workshop.pdf?dl=0 Slides] and [https://www.dropbox.com/s/jp6vzyosrd3snb1/2020S%2020.109%20Figure%20Design%20Tip%20Sheet.pdf?dl=0 Figures tip sheet]<br><br />
** [https://mit.zoom.us/rec/play/iNBo6YwegZ5PY9dtgGn74ssQ73D54xsucZtZ0tEDlTQR0RrmxChsEYfD3TZsZzairhUqn3sEcdzAva6G.MYLsBhN3mY6L7mTE?continueMode=true video]<br />
*Journal Club & Oral Presentations:<br />
** [ slides]<br />
** [ video]<br />
*Research Article structure & writing process:<br />
** [ slides]<br />
** [ video]<br />
*Research Proposals:<br />
** [ slides]<br />
** [ video]<br />
<br />
==Additional resources==<br />
<br />
===Tips from Prof. Jen Heemstra===<br />
<br />
*[https://thingsthatchangethewayithink.blogspot.com/2018/07/research-ideas-part-1-its-not-magic.html Part 1: It’s not magic (go for quantity of ideas)]<br />
*[https://thingsthatchangethewayithink.blogspot.com/2018/08/research-ideas-part-2-this-could-get.html Part 2: This could get ugly (defer judgment)]<br />
*[https://thingsthatchangethewayithink.blogspot.com/2018/09/research-ideas-part-3-ask-questions.html Part 3: Ask questions (be curious)]<br />
<br />
===Ideas for brainstorming===<br />
<br />
*[http://www.designkit.org/methods/28 IDEO's brainstorm rules, full list]<br />
*[https://www.fastcompany.com/3027722/how-the-post-it-note-could-become-the-latest-innovation-technology Post-its for innovation]<br />
*[https://twitter.com/SeaIceBeth/status/1053391424853565442 One professor's method of Post-its for research ideas]<br />
<br />
===Examples from NIH===<br />
<br />
*[https://grants.nih.gov/grants/funding/r03.htm NIH R03 grants info and examples]<br />
*[https://www.niaid.nih.gov/grants-contracts/sample-applications#r03 NIAID info and examples]</div>Prerna Bhargavahttp://measurebiology.org/wiki/20.109(F20):Communication20.109(F20):Communication2020-11-05T22:09:46Z<p>Prerna Bhargava: /* BE Communication Lab resources */</p>
<hr />
<div><div style="padding: 10px; width: 820px; border: 5px solid #0d368e;"><br />
{{Template:20.109(F20)}}<br />
<br />
<br />
==BE Communication Lab resources==<br />
Throughout the semester you will participate in workshops provided by the Instructors from the BE Communication Lab, Dr. Sean Clarke (saclarke@mit.edu) and Dr. Prerna Bhargava (bhargavp@mit.edu). These workshops will help you prepare your major communication assignments. The resources provided at these workshops will be posted below.<br />
<br />
To schedule an appointment for help from a BE Communication Fellow:<br />
*[http://mitcommlab.mit.edu/be/ BE Communication Lab]<br />
<br />
For assistance finding research articles, managing citations, etc.<br />
*[mailto:hsilver@mit.edu Howard Silver], the MIT Library's biological engineering expert<br />
*[http://libguides.mit.edu/bioleng MIT Libraries Biological Engineering Research Guide]<br />
<br />
===Workshop Slides===<br />
*[https://www.dropbox.com/s/dxc7y4xxlbw9jb4/20.109%20F20%20Abstracts%20and%20Titles%20Workshop.pdf?dl=0 Titles & Abstracts slides] [https://mit.zoom.us/rec/play/MO2ooUPFgZxqIWbvvWAws6uh4mmkvRWxUXQ0PmRQLiPB1jJnnmGwmw8zFnsaqIOvG8vwaX97ucTrV6I.PJ9DRi8Dlm_o_pZN?autoplay=true&continueMode=true&startTime=1600200666000 Title and Abstract video]<br><br />
*[https://www.dropbox.com/s/3lvu6s32lsbtnpr/20.109%20F20%20Figures%20workshop.pdf?dl=0 Figures & Captions slides] [https://mit.zoom.us/rec/play/eVjNVsv1dKJr2sdLNWfi1KDV5suFqiULCT_y99ZvKqz9PkfY3WSj1BLMU4outG_KHTrxl6fD061ge3nF.3moasScGqvhKKo3r?continueMode=true Figures and Schematics video]<br><br />
**[https://www.dropbox.com/s/jp6vzyosrd3snb1/2020S%2020.109%20Figure%20Design%20Tip%20Sheet.pdf?dl=0 Figures Tip Sheet]<br><br />
*[https://www.dropbox.com/s/7q3y8a26ir3b86z/20.109%20F20%20Journal%20Club%20workshop.pdf?dl=0 Journal Club & Oral Presentations slides]] <br />
[https://mit.zoom.us/rec/play/W2Ok0vZcxN4kU_xMz6uCjZUjrXNJWcxGeZYGaYSq5lfRm2iscXp8iGZLR2gHr0xaLqc5A6D66k4C3eOQ.dsuGTbxPFrr38-HT?continueMode=true Journal Club video]<br><br />
*[[https://www.dropbox.com/s/7achngi38vbilcc/20.109%20F20%20Research%20Article%20workshop.pdf?dl=0 Research Article structure & writing process]]<br><br />
**[https://mit.zoom.us/rec/play/8_-yqEhoAEX50nYcC9IB3LX4Rrv0cu6zISlQ57j5HWM687ZHTbUuOs5v3O-HoNT3jthF5RCPbN1GOvaI.BPfydOr9-E1hPjiW?autoplay=true&continueMode=true&startTime=1603828874000 Research Articles workshop Zoom video]<br />
*[[https://www.dropbox.com/s/y09sgejxbnsftg9/20.109%20F20%20Research%20Proposal%20workshop.pdf?dl=0 Research Proposals]]<br><br />
<br />
===Prof. Jen Heemstra's tips on research ideas and brainstorming resources===<br />
*[https://thingsthatchangethewayithink.blogspot.com/2018/07/research-ideas-part-1-its-not-magic.html Part 1: It’s not magic (go for quantity of ideas)]<br />
*[https://thingsthatchangethewayithink.blogspot.com/2018/08/research-ideas-part-2-this-could-get.html Part 2: This could get ugly (defer judgment)]<br />
*[https://thingsthatchangethewayithink.blogspot.com/2018/09/research-ideas-part-3-ask-questions.html Part 3: Ask questions (be curious)]<br />
*[http://www.designkit.org/methods/28 IDEO's brainstorm rules, full list]<br />
*[https://www.fastcompany.com/3027722/how-the-post-it-note-could-become-the-latest-innovation-technology Post-its for innovation]<br />
*[https://twitter.com/SeaIceBeth/status/1053391424853565442 One professor's method of Post-its for research ideas]<br />
<br />
===Examples from NIH===<br />
*[https://grants.nih.gov/grants/funding/r03.htm NIH R03 grants info and examples]<br />
*[https://www.niaid.nih.gov/grants-contracts/sample-applications#r03 NIAID info and examples]</div>Prerna Bhargavahttp://measurebiology.org/wiki/20.109(F20):Communication20.109(F20):Communication2020-10-16T00:44:45Z<p>Prerna Bhargava: /* BE Communication Lab resources */</p>
<hr />
<div><div style="padding: 10px; width: 820px; border: 5px solid #0d368e;"><br />
{{Template:20.109(F20)}}<br />
<br />
<br />
==BE Communication Lab resources==<br />
Throughout the semester you will participate in workshops provided by the Instructors from the BE Communication Lab, Dr. Sean Clarke (saclarke@mit.edu) and Dr. Prerna Bhargava (bhargavp@mit.edu). These workshops will help you prepare your major communication assignments. The resources provided at these workshops will be posted below.<br />
<br />
To schedule an appointment for help from a BE Communication Fellow:<br />
*[http://mitcommlab.mit.edu/be/ BE Communication Lab]<br />
<br />
For assistance finding research articles, managing citations, etc.<br />
*[mailto:hsilver@mit.edu Howard Silver], the MIT Library's biological engineering expert<br />
*[http://libguides.mit.edu/bioleng MIT Libraries Biological Engineering Research Guide]<br />
<br />
===Workshop Slides===<br />
*[https://www.dropbox.com/s/dxc7y4xxlbw9jb4/20.109%20F20%20Abstracts%20and%20Titles%20Workshop.pdf?dl=0 Titles & Abstracts slides] [https://mit.zoom.us/rec/play/MO2ooUPFgZxqIWbvvWAws6uh4mmkvRWxUXQ0PmRQLiPB1jJnnmGwmw8zFnsaqIOvG8vwaX97ucTrV6I.PJ9DRi8Dlm_o_pZN?autoplay=true&continueMode=true&startTime=1600200666000 Title and Abstract video]<br><br />
*[https://www.dropbox.com/s/3lvu6s32lsbtnpr/20.109%20F20%20Figures%20workshop.pdf?dl=0 Figures & Captions slides] [https://mit.zoom.us/rec/play/eVjNVsv1dKJr2sdLNWfi1KDV5suFqiULCT_y99ZvKqz9PkfY3WSj1BLMU4outG_KHTrxl6fD061ge3nF.3moasScGqvhKKo3r?continueMode=true Figures and Schematics video]<br><br />
**[https://www.dropbox.com/s/jp6vzyosrd3snb1/2020S%2020.109%20Figure%20Design%20Tip%20Sheet.pdf?dl=0 Figures Tip Sheet]<br><br />
*[https://www.dropbox.com/s/7q3y8a26ir3b86z/20.109%20F20%20Journal%20Club%20workshop.pdf?dl=0 Journal Club & Oral Presentations slides]] <br />
[https://mit.zoom.us/rec/play/W2Ok0vZcxN4kU_xMz6uCjZUjrXNJWcxGeZYGaYSq5lfRm2iscXp8iGZLR2gHr0xaLqc5A6D66k4C3eOQ.dsuGTbxPFrr38-HT?continueMode=true Journal Club video]<br><br />
*[[ | Research Article structure & writing process]]<br><br />
**[https://mit.zoom.us/rec/share/-sFoLIrpyDpOf4mdyGHQeJdiMLW9T6a80SZN_PQPmhlGwu5gvM4N--6ZxpDuu6oO Research Articles workshop Zoom video]<br />
*[[ |Research Proposals]]<br><br />
<br />
===Prof. Jen Heemstra's tips on research ideas and brainstorming resources===<br />
*[https://thingsthatchangethewayithink.blogspot.com/2018/07/research-ideas-part-1-its-not-magic.html Part 1: It’s not magic (go for quantity of ideas)]<br />
*[https://thingsthatchangethewayithink.blogspot.com/2018/08/research-ideas-part-2-this-could-get.html Part 2: This could get ugly (defer judgment)]<br />
*[https://thingsthatchangethewayithink.blogspot.com/2018/09/research-ideas-part-3-ask-questions.html Part 3: Ask questions (be curious)]<br />
*[http://www.designkit.org/methods/28 IDEO's brainstorm rules, full list]<br />
*[https://www.fastcompany.com/3027722/how-the-post-it-note-could-become-the-latest-innovation-technology Post-its for innovation]<br />
*[https://twitter.com/SeaIceBeth/status/1053391424853565442 One professor's method of Post-its for research ideas]<br />
<br />
===Examples from NIH===<br />
*[https://grants.nih.gov/grants/funding/r03.htm NIH R03 grants info and examples]<br />
*[https://www.niaid.nih.gov/grants-contracts/sample-applications#r03 NIAID info and examples]</div>Prerna Bhargavahttp://measurebiology.org/wiki/20.109(S20):_Spring_2020_schedule20.109(S20): Spring 2020 schedule2020-04-17T00:46:03Z<p>Prerna Bhargava: Updated Comm Lab Zoom Link</p>
<hr />
<div><div style="padding: 10px; width: 820px; border: 5px solid #0489B1;"><br />
{{Template:20.109(S20)}}<br />
<br />
<br />
Welcome to 20.109! It is our goal to make this class a useful and fun introduction to experiments and techniques in biological engineering. Though there is not time enough to show you everything needed to do research, after this class you will feel confident and familiar with some fundamental experimental approaches and laboratory protocols. You will develop good habits at the bench, which will increase the likelihood of success in your work and ensure the health and safety of you and your labmates. By the end of the semester, you will also be well-versed in good scientific practices - through your experience with scientific writing, notebook keeping, and orally presenting data and novel ideas. All of us involved in teaching 20.109 hope you will find it a satisfying challenge and an exciting experience that has lasting value.<br />
<br />
<font color= #01A9DB >'''SCHEDULE DETAILS:'''</font color><br><br />
<font color= #01A9DB >'''Lecture times:'''</font color> T/R 11 - 12 pm (56-154) <br><br />
<font color= #01A9DB >'''Laboratory section times:'''</font color> T/R 1 - 5 pm or W/F 1 - 5 pm (56-322)<br><br />
<br />
{| border=1px<br />
|'''MODULE'''<br />
|'''DAY'''<br />
|'''DATE'''<br />
|'''LECTURER'''<br />
|'''LABORATORY EXPERIMENTS'''<br />
|'''ASSIGNMENTS'''<br />
|--<br />
| <br />
| <br />
| T/W Feb 4/5 <br />
| [http://be.mit.edu/directory/noreen-lyell NLL]<br>[[Media:Sp20 Orientation lecture formatted.pptx| Orientation lecture]]<br />
| [[20.109(S20):Laboratory tour | Orientation and laboratory tour]] <br> [[Media:Sp20 M0D0 bcm.pdf | Lab Orientation Prelab]]<br />
|<br />
|--<br />
| colspan="7" |<br />
|--<br />
| 1<br />
| 1<br />
| R/F Feb 6/7 <br />
| [http://be.mit.edu/directory/angela-koehler AK]<br>[[Media:20109 M1L1 2020.pdf| M1D1 lecture]]<br />
| [[20.109(S20):Complete in silico cloning and induce TDP43 protein expression (Day1) |Complete in silico cloning and induce TDP43 protein expression]]<br>[[Media:Sp20 M1D1 nll marked.pdf| T/R prelab]]<br> [[Media:Sp20 M1D1 bcm.pdf | WF Prelab]]<br />
| <font color= #01A9DBF>'''Orientation quiz'''</font color> <br> [[20.109(S20):Homework#Due_M1D1| Homework due]]<br />
|--<br />
| 1<br />
| 2<br />
| T/W Feb 11/12 <br />
| [http://be.mit.edu/directory/angela-koehler AK]<br>[[Media:20109 M1L2 2020.pdf| M1D2 lecture]]<br />
| [[20.109(S20):Purify TDP43 protein (Day2) |Purify TDP43 protein]]<br>[[Media:Sp20 M1D2 nll marked.pdf| T/R prelab]]<br>[[Media:Sp20 M1D2 bcm marked.pdf| W/F prelab]]<br />
| [[20.109(S20):Homework#Due_M1D2| Homework due]]<br />
|--<br />
| 1<br />
| 3<br />
| R/F Feb 13/14 <br />
| [http://be.mit.edu/directory/angela-koehler AK]<br>[[Media:20109 M1L3 2020.pdf| M1D3 lecture]]<br />
| [[20.109(S20):Assess purity and concentration of TDP43 protein (Day3) | Assess purity and concentration of TDP43 protein]]<br> [[Media:Sp20 M1D3 nll marked.pdf| T/R prelab]] <br>[[Media:Sp20 M1D3 bcm marked.pdf | WF Prelab]]<br />
| [[20.109(S20):Homework#Due_M1D3| Homework due]]<br />
|--<br />
| <br />
| <br />
| T/W Feb 18/19<br />
|<br />
| <font color = #FACC2E>'''President's day holiday'''</font color><br />
|<br />
|--<br />
| 1<br />
| 4<br />
| R/F Feb 20/21<br />
| [http://be.mit.edu/directory/angela-koehler AK]<br>[[Media:20109 M1L4 2020.pdf| M1D4 lecture]]<br />
| [[20.109(S20):Perform small molecule microarray (SMM) with TDP43 protein (Day4) |Perform small molecule microarray (SMM) with TDP43 protein]]<br>[[Media:Sp20 M1D4 nll marked.pdf| T/R prelab]] <br> [[Media:Sp20 M1D4 bcm marked.pdf | WF prelab]]<br />
| <font color= #01A9DB>'''Laboratory quiz'''</font color> <br> [[20.109(S20):Homework#Due_M1D4| Homework due]]<br />
|--<br />
| 1<br />
| 5<br />
| T/W Feb 25/26 <br />
| [http://be.mit.edu/directory/angela-koehler AK]<br>[[Media:20109 M1L5 2020.pdf| M1D5 lecture]]<br />
| [[20.109(S20):Scan SMM slides to identify binders of TDP43 protein (Day5) |Scan SMM slides to identify binders of TDP43 protein]]<br>[[Media:Sp20 M1D5 nll marked.pdf| T/R prelab]] <br> [[Media:Sp20 M1D5 bcm marked.pdf | WF prelab]]<br />
| [[20.109(S20):Homework#Due_M1D5| Homework due]]<br />
|--<br />
| 1<br />
| 6<br />
| R/F Feb 27/28<br />
| [http://be.mit.edu/directory/angela-koehler AK]<br>[[Media:20109 M1L6 2020.pdf| M1D6 lecture]]<br />
| [[20.109(S20):Analyze SMM data (Day6) |Analyze SMM data]]<br>[[Media:Sp20 M1D6 nll marked.pdf| T/R Prelab]] <br> [[Media:Sp20 M1D6 bcm marked.pdf | WF Prelab]]<br />
| [[20.109(S20):Homework#Due_M1D6| Homework due]]<br />
|--<br />
| 1<br />
| 7<br />
| T/W Mar 3/4<br />
| [http://be.mit.edu/directory/angela-koehler AK]<br>[[Media:20109 M1L7 2020.pdf| M1D7 lecture]]<br />
| [[20.109(S20):Examine TDP43 binders for chemical features (Day7) |Examine TDP43 binders for chemical features]]<br>[[Media:Sp20 M1D7 nll marked.pdf| T/R prelab]] <br> [[Media:Sp20 M1D7 bcm marked.pdf | WF Prelab]]<br />
| <font color= #01A9DB>'''Laboratory quiz'''</font color> <br> [[20.109(S20):Homework#Due_M1D7| Homework due]]<br />
|--<br />
| colspan="7" |<br />
|--<br />
| 2<br />
| 1<br />
| R/F Mar 5/6<br />
| [http://be.mit.edu/directory/noreen-lyell NLL]<br>[[Media:Sp20 M2D1Lecture nll.pdf| M2D1 lecture]]<br />
| [[20.109(S20):Prepare cells for RNA purification and practice RNA-seq data analysis methods (Day1)| Prepare cells for RNA purification and practice RNA-seq data analysis methods]]<br>[[Media:Sp20_M2D1_LMMmarked.pdf| T/R prelab]]<br>[[Media:Sp20_M2D1_bcm_marked.pdf| W/F prelab]]<br />
| [[20.109(S20):Homework#Due_M2D1| Homework due]]<br> [[20.109(S20): Data Summary| <font color=#B40404>'''Data summary draft due'''</font color>]] Sun, Mar 8 at 10 pm<br><br />
|--<br />
| 2<br />
| 2<br />
| T/W Mar 10/11<br />
| [http://be.mit.edu/directory/ernest-fraenkel EF]<br>[[Media:Lecture 300311 for posting.pdf| M2D2 lecture]]<br />
| [[20.109(S20):Treat cells with etoposide and analyze RNA-seq data (Day2)| Treat cells with etoposide and analyze RNA-seq data]]<br>[[Media:Sp20_M2D2_LMMmarked.pdf| T/R prelab]] <br> [[Media:Sp20 M2D2 bcm marked.pdf | WF Prelab]]<br />
| [[20.109(S20):Homework#Due_M2D2| Homework due]]<br />
|--<br />
| 2<br />
| 3<br />
| R/F Mar 12/13<br />
| [http://be.mit.edu/directory/ernest-fraenkel EF] <br> <br />
| [[20.109(S20):Purify RNA from etoposide-treated cells and and generate cDNA (Day3)| Purify RNA from etoposide-treated cells and generate cDNA]]<br>[[Media:Sp20_M2D3_LMMmarked.pdf| T/R prelab]] <br> [[Media:Sp20 M2D3 bcm marked.pdf | WF Prelab]]<br />
| <br />
|--<br />
| colspan="7" | <center><font color = #0f688c > '''First, we hope that you are all well and taking care of yourselves!! Second, we want to welcome you all back to the Sp20 semester of 20.109!! This will be an interesting endeavor for all of us and we have done / are doing our best to provide you all a positive experience. In that, several changes and modifications have been made to the remainder of the schedule. Please review the details below and, as always, feel free to share feedback...now more than ever we need your ideas to improve 20.109 and ensure a rewarding outcome for everyone! A summary of the remote teaching strategy is linked [[Media:Sp20 Remote teaching strategy.pdf |here]].'''</font color></center><br />
|--<br />
| 2<br />
| 6<br />
| T/W Mar/Apr 31/1<br />
| [http://be.mit.edu/directory/ernest-fraenkel EF]<br>[https://www.google.com/url?q=https%3A%2F%2Fmit.zoom.us%2Fj%2F348659452&sa=D&ust=1585502144595000&usg=AFQjCNG0iLNO3f-D3L837sTrvXtzc-0Vtw Zoom access]<br> [https://mit.zoom.us/rec/share/_elkEKzgsUVOS9bK9EbfCqwMAdr0aaa81CQZ-6ZZzgnAyffHAkkaD9A1zV9ugqQ M2D6 video] <br> [[Media:Module 2 Lecture 200331 for posting FINAL.pdf| M2D6 slides]]<br />
| [[20.109(S20):Analyze RNA-seq data and select gene targets for quantitative PCR (qPCR) experiment (Day 6)| Analyze RNA-seq data and select gene targets for quantitative PCR (qPCR) experiment]]<br><br />
[https://mit.zoom.us/s/613303093 T/R Zoom access], [https://mit.zoom.us/rec/share/xuxzd6Pt81JOU5GRx1HOd6sKN4PUaaa8hiAd8_UPzh2x3oo4anGmidcVM1e7r_wV?startTime=1585674840000 T/R prelab video], [[Media: Sp20_M2D6_LMM.pdf| T/R prelab slides]] <br> [https://mit.zoom.us/j/735216560 W/F Zoom access], [https://mit.zoom.us/rec/share/tM4pNrPa20BLAc_q9kz5e5E4RpbZX6a80SJK8vMNmU3q7wz67l-FelmAozaxutO8 W/F prelab video], [[Media:Sp20 M2D6 bcm unmarked.pdf| W/F prelab slides]]<br />
| [[20.109(S20):Homework#Due_M2D6| Homework due]] <br />
|--<br />
| 2<br />
| 7<br />
| R/F Apr 2/3<br />
| [http://be.mit.edu/directory/ernest-fraenkel EF]<br>[https://www.google.com/url?q=https%3A%2F%2Fmit.zoom.us%2Fj%2F348659452&sa=D&ust=1585502144595000&usg=AFQjCNG0iLNO3f-D3L837sTrvXtzc-0Vtw Zoom access]<br>[https://mit.zoom.us/rec/share/_Y9sPey3z1hJGKPXxU_jBPINFbq6X6a82yIZqPdbxBrHLdTbyLEevSHmJxUKTViR M2D7 video] <br> [[Media:Lecture 3 RNA-Seq for posting.pdf| M2D7 slides]]<br />
| [[20.109(S20):Perform qPCR experiment and continue RNA-seq data analysis (Day7) | Review qPCR experiment and complete statistical analysis]]<br>[https://mit.zoom.us/s/613303093 T/R Zoom access], [https://mit.zoom.us/rec/share/x957aLbX0k5LQYnW7U3zWfAgEam4X6a81yge-KBZyElN1gM40LtpSxUi5hxSORtt?startTime=1585847490000 T/R prelab video], [[Media: Sp20_M2D7_LMM.pdf| T/R prelab slides]] <br> [https://mit.zoom.us/j/735216560 W/F Zoom access], [https://mit.zoom.us/rec/share/48NRJqHu02hLGNLp7l3dfbQZPYXieaa81XMY_6APnU9RluvDKvaXQfF3qkRJ1bu_ WF prelab video], [[Media:Sp20 M2D7 bcm UNMARKED.pdf | WF prelab slides]]<br />
| <font color= #01A9DB>'''Laboratory quiz'''</font color> <br>[[20.109(S20):Homework#Due_M2D7| Homework due]]<br>[[20.109(S20): Data Summary| <font color=#B40404>'''Data summary revision due'''</font color>]] Sat, Apr 4 at 10 pm <br>[https://be20109s20.blogspot.com/ Blog post due] Mon, Apr 6 at 10 pm <br><br />
|--<br />
| 2<br />
| 8<br />
| T/W Apr 7/8<br />
| [http://be.mit.edu/directory/ernest-fraenkel EF]<br>[https://www.google.com/url?q=https%3A%2F%2Fmit.zoom.us%2Fj%2F348659452&sa=D&ust=1585502144595000&usg=AFQjCNG0iLNO3f-D3L837sTrvXtzc-0Vtw Zoom access]<br>[https://mit.zoom.us/rec/share/7MVRHeGgxnxIUtbA1EPCZekTPonfT6a8hiUdrPALn0vGNKg00SKcZRoEF2p4I905 M2D8 video]<br>[[Media:Lecture 4 transcriptional regulation FINAL to post.pdf|M2D8 slides]]<br />
| [[20.109(S20):Examine qPCR results and complete data analysis (Day8) | Complete RNA-seq data analysis]]<br>[https://mit.zoom.us/s/613303093 T/R Zoom access],[https://mit.zoom.us/rec/share/4eNSHo7f6U5IUp31-HyEaLAxAbnuX6a8g3ce_aZcnhqsCwkfQw9Zcc7oyKPL4gnH?startTime=1586279524000 T/R prelab video], [[Media: Sp20_M2D8_LMM.pdf | T/R prelab slides]]<br> [https://mit.zoom.us/j/735216560 W/F Zoom access], [https://mit.zoom.us/rec/share/38FbIoD3qntJTI3wuALwSP4FOL3Leaa8gXUbrvZeyUomVGcB1C_E7a6zsXa-GRJa W/F prelab video], [[Media:Sp20 M2D8 bcm unmarked.pdf| WF prelab slides]]<br />
| [[20.109(S20):Homework#Due_M2D8| Homework due]]<br />
|--<br />
| 2<br />
| 9<br />
| R/F Apr 9/10<br />
| BE Comm Lab<br> [https://mit.zoom.us/j/714801029 Zoom access]<br>[https://mit.zoom.us/rec/share/-sFoLIrpyDpOf4mdyGHQeJdiMLW9T6a80SZN_PQPmhlGwu5gvM4N--6ZxpDuu6oO M2D9 video]<br />
|Prepare M2 Major assignments: Journal club presentation and Research article<br>[https://mit.zoom.us/j/137247921 T/R Zoom access], [https://mit.zoom.us/rec/share/zMFfNLvUx35LQZXm81HEV7EgIKP7eaa82iIc86YEy0yWAbiNrz9HLzjA-hDoo1R4 T/R prelab video], [[Media:Sp20 M2D9Prelab nll.pdf|T/R prelab slides]]<br> [https://mit.zoom.us/j/735216560 W/F Zoom access], [https://mit.zoom.us/rec/share/4_xXILPO2GdLWYXQsFzUCvYcE73rT6a8gCka_fQEzkbSJypqfq7CeIAspEvXlPKZ W/F prelab video], [[Media:Sp20 M2D9Prelab nll.pdf|W/F prelab slides]]<br />
| <font color= #01A9DB>'''Laboratory quiz'''</font color> <br> [[20.109(S20):Homework#Due_M2D9| Homework due]] <br> [[20.109(S20):Journal club presentations (Day4 and 5)|<font color=#B40404>'''Journal club presentation due'''</font color>]] Sat, Apr 11 at 10 pm <br>[https://be20109s20.blogspot.com/ Blog post due] Mon, Apr 13 at 10 pm <br><br />
|--<br />
| colspan="7" |<br />
|--<br />
| 3<br />
| 1<br />
| T/W Apr 14/15 <br />
| [http://be.mit.edu/directory/leslie-mcclain LM]<br>[https://mit.zoom.us/s/613303093 Zoom access]<br>[[Media:Sp20_Mod3_lecture 1.pdf|M3D1 slides]]<br>[https://mit.zoom.us/rec/share/_egpI63800VLSa_fxVz5ZK1iAbrUX6a81yMbrvtexUgATJB4EXCPChegA1vEGO9u?startTime=1586876971000 M3D1 video]<br />
| [[20.109(S20):Enrich candidate clones using fluorescence-activated cell sorter (FACS) (Day1)| Enrich candidate clones using fluorescence-activated cell sorter (FACS)]]<br>[https://mit.zoom.us/j/137247921 T/R Zoom access], [https://mit.zoom.us/rec/share/4Z0oEY6s_WJJZ43S9UPvYKIfFKLvX6a80CNMrPJbzhlG5xmsEUZbnQpncq4-uB8Z T/R prelab video], [[Media:Sp20 M3D1 nll.pdf|T/R prelab slides]]<br> [https://mit.zoom.us/j/735216560 W/F Zoom access], [https://mit.zoom.us/rec/share/w-xIM4383W5OT9LXxmPeYvAeWYTqX6a81SAf8vFfmBq0uu3N_aBsQAOdLlVV3XbI W/F prelab video], [[Media:Sp20 M3D1 bcm unmarked.pdf | WF prelab slides]]<br />
| [[20.109(S20):Homework#Due_M3D1| Homework due]] <br><br />
|--<br />
| 3<br />
| 2<br />
| R/F Apr 16/17<br />
| BE Comm Lab<br>[https://mit.zoom.us/j/714801029 Zoom access]<br>[https://mit.zoom.us/rec/share/vO4sCK3R13lLQLPz92_FfqdmMMfGT6a81SFM8_YEzxlVVanXWhZYdlr9o1t1XnjW M3D2 video]<br />
| [[20.109(S20):Harvest candidate clones (Day2) |Harvest candidate clones and prepare for sequencing]]<br>[https://mit.zoom.us/j/137247921 T/R Zoom access], [ T/R prelab video], [[Media:Sp20 M3D2 nll.pdf|T/R prelab slides]]<br> [https://mit.zoom.us/j/735216560 W/F Zoom access]<br />
| [[20.109(S20):Homework#Due_M3D2| Homework due]] <br> <br />
|--<br />
| <br />
| <br />
| T/W Apr 21/22<br />
|<br />
| <font color = #FACC2E>'''Patriots' day holiday'''</font color><br />
| [[20.109(S20): Research article| <font color=#B40404>'''Research article due'''</font color>]] Mon, Apr 20 at 10 pm <br> [https://be20109s20.blogspot.com/ Blog post due] Tue, Apr 21 at 10 pm<br />
|--<br />
| 3<br />
| 3<br />
| R/F Apr 23/24<br />
| [http://be.mit.edu/directory/leslie-mcclain LM]<br>[https://mit.zoom.us/s/613303093 Zoom access]<br />
| [[20.109(S20):Identify clones to characterize (Day3) |Identify clones to characterize]]<br>[https://mit.zoom.us/j/137247921 T/R Zoom access]<br> [https://mit.zoom.us/j/735216560 W/F Zoom access]<br />
| <font color= #01A9DB>'''Laboratory quiz'''</font color> <br> [[20.109(S20):Homework#Due_M3D3| Homework due]] <br> <br />
|--<br />
| <br />
| <br />
| T/W Apr 28/29<br />
| [http://be.mit.edu/directory/leslie-mcclain LM]<br>[https://mit.zoom.us/s/613303093 Zoom access]<br />
| Research proposal pitches, will be scheduled with each team during laboratory time<br />
|<br />
|--<br />
| 3<br />
| 4<br />
| R/F Apr/May 30/1<br />
| [http://be.mit.edu/directory/leslie-mcclain LM]<br>[https://mit.zoom.us/s/613303093 Zoom access]<br />
| [[20.109(S20):Characterize clone by titration using flow cytometry (Day4)|Characterize clone by titration using flow cytometry ]]<br>[https://mit.zoom.us/j/137247921 T/R Zoom access]<br> [https://mit.zoom.us/j/735216560 W/F Zoom access]<br />
| [[20.109(S20):Homework#Due_M3D4| Homework due]]<br />
|--<br />
| 3<br />
| 5<br />
| T/W May 5/6<br />
| Guest, SC<br>[https://mit.zoom.us/s/613303093 Zoom access]<br />
| [[20.109(S20):Analyze titration curves (Day5) |Analyze titration curves ]]<br>[https://mit.zoom.us/j/137247921 T/R Zoom access]<br> [https://mit.zoom.us/j/735216560 W/F Zoom access]<br />
| [[20.109(S20):Homework#Due_M3D5| Homework due]]<br />
|--<br />
| <br />
| <br />
| R/F May 7/8<br />
|<br />
| [[20.109(S20):Research proposal presentation | <font color=#B40404>'''Research proposal presentations'''</font color>]], will be scheduled with each team during laboratory time<br />
| <br />
|--<br />
|<br />
|<br />
| T May 12<br />
| <br />
| <font color = #FACC2E>'''Feedback session, lunch will be rescheduled!'''</font color><br />
| [[20.109(S20): Mini-report | <font color=#B40404>'''Mini-report due'''</font color>]] Mon, May 11 at 10 pm <br>[https://be20109s20.blogspot.com/ Blog post due] Tue, May 12 at 10 pm<br />
|}<br />
</div></div>Prerna Bhargavahttp://measurebiology.org/wiki/20.109(S20):_Spring_2020_schedule20.109(S20): Spring 2020 schedule2020-04-09T17:14:36Z<p>Prerna Bhargava: Updated Comm Lab Zoom Link</p>
<hr />
<div><div style="padding: 10px; width: 820px; border: 5px solid #0489B1;"><br />
{{Template:20.109(S20)}}<br />
<br />
<br />
Welcome to 20.109! It is our goal to make this class a useful and fun introduction to experiments and techniques in biological engineering. Though there is not time enough to show you everything needed to do research, after this class you will feel confident and familiar with some fundamental experimental approaches and laboratory protocols. You will develop good habits at the bench, which will increase the likelihood of success in your work and ensure the health and safety of you and your labmates. By the end of the semester, you will also be well-versed in good scientific practices - through your experience with scientific writing, notebook keeping, and orally presenting data and novel ideas. All of us involved in teaching 20.109 hope you will find it a satisfying challenge and an exciting experience that has lasting value.<br />
<br />
<font color= #01A9DB >'''SCHEDULE DETAILS:'''</font color><br><br />
<font color= #01A9DB >'''Lecture times:'''</font color> T/R 11 - 12 pm (56-154) <br><br />
<font color= #01A9DB >'''Laboratory section times:'''</font color> T/R 1 - 5 pm or W/F 1 - 5 pm (56-322)<br><br />
<br />
{| border=1px<br />
|'''MODULE'''<br />
|'''DAY'''<br />
|'''DATE'''<br />
|'''LECTURER'''<br />
|'''LABORATORY EXPERIMENTS'''<br />
|'''ASSIGNMENTS'''<br />
|--<br />
| <br />
| <br />
| T/W Feb 4/5 <br />
| [http://be.mit.edu/directory/noreen-lyell NLL]<br>[[Media:Sp20 Orientation lecture formatted.pptx| Orientation lecture]]<br />
| [[20.109(S20):Laboratory tour | Orientation and laboratory tour]] <br> [[Media:Sp20 M0D0 bcm.pdf | Lab Orientation Prelab]]<br />
|<br />
|--<br />
| colspan="7" |<br />
|--<br />
| 1<br />
| 1<br />
| R/F Feb 6/7 <br />
| [http://be.mit.edu/directory/angela-koehler AK]<br>[[Media:20109 M1L1 2020.pdf| M1D1 lecture]]<br />
| [[20.109(S20):Complete in silico cloning and induce TDP43 protein expression (Day1) |Complete in silico cloning and induce TDP43 protein expression]]<br>[[Media:Sp20 M1D1 nll marked.pdf| T/R prelab]]<br> [[Media:Sp20 M1D1 bcm.pdf | WF Prelab]]<br />
| <font color= #01A9DBF>'''Orientation quiz'''</font color> <br> [[20.109(S20):Homework#Due_M1D1| Homework due]]<br />
|--<br />
| 1<br />
| 2<br />
| T/W Feb 11/12 <br />
| [http://be.mit.edu/directory/angela-koehler AK]<br>[[Media:20109 M1L2 2020.pdf| M1D2 lecture]]<br />
| [[20.109(S20):Purify TDP43 protein (Day2) |Purify TDP43 protein]]<br>[[Media:Sp20 M1D2 nll marked.pdf| T/R prelab]]<br>[[Media:Sp20 M1D2 bcm marked.pdf| W/F prelab]]<br />
| [[20.109(S20):Homework#Due_M1D2| Homework due]]<br />
|--<br />
| 1<br />
| 3<br />
| R/F Feb 13/14 <br />
| [http://be.mit.edu/directory/angela-koehler AK]<br>[[Media:20109 M1L3 2020.pdf| M1D3 lecture]]<br />
| [[20.109(S20):Assess purity and concentration of TDP43 protein (Day3) | Assess purity and concentration of TDP43 protein]]<br> [[Media:Sp20 M1D3 nll marked.pdf| T/R prelab]] <br>[[Media:Sp20 M1D3 bcm marked.pdf | WF Prelab]]<br />
| [[20.109(S20):Homework#Due_M1D3| Homework due]]<br />
|--<br />
| <br />
| <br />
| T/W Feb 18/19<br />
|<br />
| <font color = #FACC2E>'''President's day holiday'''</font color><br />
|<br />
|--<br />
| 1<br />
| 4<br />
| R/F Feb 20/21<br />
| [http://be.mit.edu/directory/angela-koehler AK]<br>[[Media:20109 M1L4 2020.pdf| M1D4 lecture]]<br />
| [[20.109(S20):Perform small molecule microarray (SMM) with TDP43 protein (Day4) |Perform small molecule microarray (SMM) with TDP43 protein]]<br>[[Media:Sp20 M1D4 nll marked.pdf| T/R prelab]] <br> [[Media:Sp20 M1D4 bcm marked.pdf | WF prelab]]<br />
| <font color= #01A9DB>'''Laboratory quiz'''</font color> <br> [[20.109(S20):Homework#Due_M1D4| Homework due]]<br />
|--<br />
| 1<br />
| 5<br />
| T/W Feb 25/26 <br />
| [http://be.mit.edu/directory/angela-koehler AK]<br>[[Media:20109 M1L5 2020.pdf| M1D5 lecture]]<br />
| [[20.109(S20):Scan SMM slides to identify binders of TDP43 protein (Day5) |Scan SMM slides to identify binders of TDP43 protein]]<br>[[Media:Sp20 M1D5 nll marked.pdf| T/R prelab]] <br> [[Media:Sp20 M1D5 bcm marked.pdf | WF prelab]]<br />
| [[20.109(S20):Homework#Due_M1D5| Homework due]]<br />
|--<br />
| 1<br />
| 6<br />
| R/F Feb 27/28<br />
| [http://be.mit.edu/directory/angela-koehler AK]<br>[[Media:20109 M1L6 2020.pdf| M1D6 lecture]]<br />
| [[20.109(S20):Analyze SMM data (Day6) |Analyze SMM data]]<br>[[Media:Sp20 M1D6 nll marked.pdf| T/R Prelab]] <br> [[Media:Sp20 M1D6 bcm marked.pdf | WF Prelab]]<br />
| [[20.109(S20):Homework#Due_M1D6| Homework due]]<br />
|--<br />
| 1<br />
| 7<br />
| T/W Mar 3/4<br />
| [http://be.mit.edu/directory/angela-koehler AK]<br>[[Media:20109 M1L7 2020.pdf| M1D7 lecture]]<br />
| [[20.109(S20):Examine TDP43 binders for chemical features (Day7) |Examine TDP43 binders for chemical features]]<br>[[Media:Sp20 M1D7 nll marked.pdf| T/R prelab]] <br> [[Media:Sp20 M1D7 bcm marked.pdf | WF Prelab]]<br />
| <font color= #01A9DB>'''Laboratory quiz'''</font color> <br> [[20.109(S20):Homework#Due_M1D7| Homework due]]<br />
|--<br />
| colspan="7" |<br />
|--<br />
| 2<br />
| 1<br />
| R/F Mar 5/6<br />
| [http://be.mit.edu/directory/noreen-lyell NLL]<br>[[Media:Sp20 M2D1Lecture nll.pdf| M2D1 lecture]]<br />
| [[20.109(S20):Prepare cells for RNA purification and practice RNA-seq data analysis methods (Day1)| Prepare cells for RNA purification and practice RNA-seq data analysis methods]]<br>[[Media:Sp20_M2D1_LMMmarked.pdf| T/R prelab]]<br>[[Media:Sp20_M2D1_bcm_marked.pdf| W/F prelab]]<br />
| [[20.109(S20):Homework#Due_M2D1| Homework due]]<br> [[20.109(S20): Data Summary| <font color=#B40404>'''Data summary draft due'''</font color>]] Sun, Mar 8 at 10 pm<br><br />
|--<br />
| 2<br />
| 2<br />
| T/W Mar 10/11<br />
| [http://be.mit.edu/directory/ernest-fraenkel EF]<br>[[Media:Lecture 300311 for posting.pdf| M2D2 lecture]]<br />
| [[20.109(S20):Treat cells with etoposide and analyze RNA-seq data (Day2)| Treat cells with etoposide and analyze RNA-seq data]]<br>[[Media:Sp20_M2D2_LMMmarked.pdf| T/R prelab]] <br> [[Media:Sp20 M2D2 bcm marked.pdf | WF Prelab]]<br />
| [[20.109(S20):Homework#Due_M2D2| Homework due]]<br />
|--<br />
| 2<br />
| 3<br />
| R/F Mar 12/13<br />
| [http://be.mit.edu/directory/ernest-fraenkel EF] <br> <br />
| [[20.109(S20):Purify RNA from etoposide-treated cells and and generate cDNA (Day3)| Purify RNA from etoposide-treated cells and generate cDNA]]<br>[[Media:Sp20_M2D3_LMMmarked.pdf| T/R prelab]] <br> [[Media:Sp20 M2D3 bcm marked.pdf | WF Prelab]]<br />
| <br />
|--<br />
| colspan="7" | <center><font color = #0f688c > '''First, we hope that you are all well and taking care of yourselves!! Second, we want to welcome you all back to the Sp20 semester of 20.109!! This will be an interesting endeavor for all of us and we have done / are doing our best to provide you all a positive experience. In that, several changes and modifications have been made to the remainder of the schedule. Please review the details below and, as always, feel free to share feedback...now more than ever we need your ideas to improve 20.109 and ensure a rewarding outcome for everyone! A summary of the remote teaching strategy is linked [[Media:Sp20 Remote teaching strategy.pdf |here]].'''</font color></center><br />
|--<br />
| 2<br />
| 6<br />
| T/W Mar/Apr 31/1<br />
| [http://be.mit.edu/directory/ernest-fraenkel EF]<br>[https://www.google.com/url?q=https%3A%2F%2Fmit.zoom.us%2Fj%2F348659452&sa=D&ust=1585502144595000&usg=AFQjCNG0iLNO3f-D3L837sTrvXtzc-0Vtw Zoom access]<br> [https://mit.zoom.us/rec/share/_elkEKzgsUVOS9bK9EbfCqwMAdr0aaa81CQZ-6ZZzgnAyffHAkkaD9A1zV9ugqQ M2D6 video] <br> [[Media:Module 2 Lecture 200331 for posting FINAL.pdf| M2D6 slides]]<br />
| [[20.109(S20):Analyze RNA-seq data and select gene targets for quantitative PCR (qPCR) experiment (Day 6)| Analyze RNA-seq data and select gene targets for quantitative PCR (qPCR) experiment]]<br><br />
[https://mit.zoom.us/s/613303093 T/R Zoom access], [https://mit.zoom.us/rec/share/xuxzd6Pt81JOU5GRx1HOd6sKN4PUaaa8hiAd8_UPzh2x3oo4anGmidcVM1e7r_wV?startTime=1585674840000 T/R prelab video], [[Media: Sp20_M2D6_LMM.pdf| T/R prelab slides]] <br> [https://mit.zoom.us/j/735216560 W/F Zoom access], [https://mit.zoom.us/rec/share/tM4pNrPa20BLAc_q9kz5e5E4RpbZX6a80SJK8vMNmU3q7wz67l-FelmAozaxutO8 W/F prelab video], [[Media:Sp20 M2D6 bcm unmarked.pdf| W/F prelab slides]]<br />
| [[20.109(S20):Homework#Due_M2D6| Homework due]] <br />
|--<br />
| 2<br />
| 7<br />
| R/F Apr 2/3<br />
| [http://be.mit.edu/directory/ernest-fraenkel EF]<br>[https://www.google.com/url?q=https%3A%2F%2Fmit.zoom.us%2Fj%2F348659452&sa=D&ust=1585502144595000&usg=AFQjCNG0iLNO3f-D3L837sTrvXtzc-0Vtw Zoom access]<br>[https://mit.zoom.us/rec/share/_Y9sPey3z1hJGKPXxU_jBPINFbq6X6a82yIZqPdbxBrHLdTbyLEevSHmJxUKTViR M2D7 video] <br> [[Media:Lecture 3 RNA-Seq for posting.pdf| M2D7 slides]]<br />
| [[20.109(S20):Perform qPCR experiment and continue RNA-seq data analysis (Day7) | Review qPCR experiment and complete statistical analysis]]<br>[https://mit.zoom.us/s/613303093 T/R Zoom access], [https://mit.zoom.us/rec/share/x957aLbX0k5LQYnW7U3zWfAgEam4X6a81yge-KBZyElN1gM40LtpSxUi5hxSORtt?startTime=1585847490000 T/R prelab video], [[Media: Sp20_M2D7_LMM.pdf| T/R prelab slides]] <br> [https://mit.zoom.us/j/735216560 W/F Zoom access], [https://mit.zoom.us/rec/share/48NRJqHu02hLGNLp7l3dfbQZPYXieaa81XMY_6APnU9RluvDKvaXQfF3qkRJ1bu_ WF prelab video], [[Media:Sp20 M2D7 bcm UNMARKED.pdf | WF prelab slides]]<br />
| <font color= #01A9DB>'''Laboratory quiz'''</font color> <br>[[20.109(S20):Homework#Due_M2D7| Homework due]]<br>[[20.109(S20): Data Summary| <font color=#B40404>'''Data summary revision due'''</font color>]] Sat, Apr 4 at 10 pm <br>[https://be20109s20.blogspot.com/ Blog post due] Mon, Apr 6 at 10 pm <br><br />
|--<br />
| 2<br />
| 8<br />
| T/W Apr 7/8<br />
| [http://be.mit.edu/directory/ernest-fraenkel EF]<br>[https://www.google.com/url?q=https%3A%2F%2Fmit.zoom.us%2Fj%2F348659452&sa=D&ust=1585502144595000&usg=AFQjCNG0iLNO3f-D3L837sTrvXtzc-0Vtw Zoom access]<br>[https://mit.zoom.us/rec/share/7MVRHeGgxnxIUtbA1EPCZekTPonfT6a8hiUdrPALn0vGNKg00SKcZRoEF2p4I905 M2D8 video]<br>[[Media:Lecture 4 transcriptional regulation FINAL to post.pdf|M2D8 slides]]<br />
| [[20.109(S20):Examine qPCR results and complete data analysis (Day8) | Complete RNA-seq data analysis]]<br>[https://mit.zoom.us/s/613303093 T/R Zoom access],[https://mit.zoom.us/rec/share/4eNSHo7f6U5IUp31-HyEaLAxAbnuX6a8g3ce_aZcnhqsCwkfQw9Zcc7oyKPL4gnH?startTime=1586279524000 T/R prelab video], [[Media: Sp20_M2D8_LMM.pdf | T/R prelab slides]]<br> [https://mit.zoom.us/j/735216560 W/F Zoom access], [https://mit.zoom.us/rec/share/38FbIoD3qntJTI3wuALwSP4FOL3Leaa8gXUbrvZeyUomVGcB1C_E7a6zsXa-GRJa W/F prelab video], [[Media:Sp20 M2D8 bcm unmarked.pdf| WF prelab slides]]<br />
| [[20.109(S20):Homework#Due_M2D8| Homework due]]<br />
|--<br />
| 2<br />
| 9<br />
| R/F Apr 9/10<br />
| BE Comm Lab<br> [https://mit.zoom.us/j/714801029 Zoom access]<br>[https://mit.zoom.us/rec/share/-sFoLIrpyDpOf4mdyGHQeJdiMLW9T6a80SZN_PQPmhlGwu5gvM4N--6ZxpDuu6oO M2D9 video]<br />
| Prepare M2 Major assignments: Journal club presentation and Research article<br>[https://mit.zoom.us/j/137247921 T/R Zoom access], [ T/R Prelab video], [[Media:Sp20 M2D9Prelab nll.pdf|T/R prelab slides]]<br> [https://mit.zoom.us/j/735216560 W/F Zoom access]<br />
| <font color= #01A9DB>'''Laboratory quiz'''</font color> <br> [[20.109(S20):Homework#Due_M2D9| Homework due]] <br> [[20.109(S20):Journal club presentations (Day4 and 5)|<font color=#B40404>'''Journal club presentation due'''</font color>]] Sat, Apr 11 at 10 pm <br>[https://be20109s20.blogspot.com/ Blog post due] Mon, Apr 13 at 10 pm <br><br />
|--<br />
| colspan="7" |<br />
|--<br />
| 3<br />
| 1<br />
| T/W Apr 14/15 <br />
| [http://be.mit.edu/directory/leslie-mcclain LM]<br><br />
| [[20.109(S20):Enrich candidate clones using fluorescence-activated cell sorter (FACS) (Day1)| Enrich candidate clones using fluorescence-activated cell sorter (FACS)]]<br>[https://mit.zoom.us/j/137247921 T/R Zoom access]<br> [https://mit.zoom.us/j/735216560 W/F Zoom access]<br />
| [[20.109(S20):Homework#Due_M3D1| Homework due]] <br><br />
|--<br />
| 3<br />
| 2<br />
| R/F Apr 16/17<br />
| BE Comm Lab<br><br />
| [[20.109(S20):Harvest candidate clones (Day2) |Harvest candidate clones and prepare for sequencing]]<br>[https://mit.zoom.us/j/137247921 T/R Zoom access]<br> [https://mit.zoom.us/j/735216560 W/F Zoom access]<br />
| [[20.109(S20):Homework#Due_M3D2| Homework due]] <br> <br />
|--<br />
| <br />
| <br />
| T/W Apr 21/22<br />
|<br />
| <font color = #FACC2E>'''Patriots' day holiday'''</font color><br />
| [[20.109(S20): Research article| <font color=#B40404>'''Research article due'''</font color>]] Mon, Apr 20 at 10 pm <br> [https://be20109s20.blogspot.com/ Blog post due] Tue, Apr 21 at 10 pm<br />
|--<br />
| 3<br />
| 3<br />
| R/F Apr 23/24<br />
| [http://be.mit.edu/directory/leslie-mcclain LM]<br><br />
| [[20.109(S20):Identify clones to characterize (Day3) |Identify clones to characterize]]<br>[https://mit.zoom.us/j/137247921 T/R Zoom access]<br> [https://mit.zoom.us/j/735216560 W/F Zoom access]<br />
| <font color= #01A9DB>'''Laboratory quiz'''</font color> <br> [[20.109(S20):Homework#Due_M3D3| Homework due]] <br> <br />
|--<br />
| <br />
| <br />
| T/W Apr 28/29<br />
| [http://be.mit.edu/directory/leslie-mcclain LM]<br />
| Research proposal pitches, will be scheduled with each team during laboratory time<br />
|<br />
|--<br />
| 3<br />
| 4<br />
| R/F Apr/May 30/1<br />
| [http://be.mit.edu/directory/leslie-mcclain LM]<br><br />
| [[20.109(S20):Characterize clone by titration using flow cytometry (Day4)|Characterize clone by titration using flow cytometry ]]<br>[https://mit.zoom.us/j/137247921 T/R Zoom access]<br> [https://mit.zoom.us/j/735216560 W/F Zoom access]<br />
| [[20.109(S20):Homework#Due_M3D4| Homework due]]<br />
|--<br />
| 3<br />
| 5<br />
| T/W May 5/6<br />
| Guest, SC<br />
| [[20.109(S20):Analyze titration curves (Day5) |Analyze titration curves ]]<br>[https://mit.zoom.us/j/137247921 T/R Zoom access]<br> [https://mit.zoom.us/j/735216560 W/F Zoom access]<br />
| [[20.109(S20):Homework#Due_M3D5| Homework due]]<br />
|--<br />
| <br />
| <br />
| R/F May 7/8<br />
|<br />
| [[20.109(S20):Research proposal presentation | <font color=#B40404>'''Research proposal presentations'''</font color>]], will be scheduled with each team during laboratory time<br />
| <br />
|--<br />
|<br />
|<br />
| T May 12<br />
| <br />
| <font color = #FACC2E>'''Feedback session, lunch will be rescheduled!'''</font color><br />
| [[20.109(S20): Mini-report | <font color=#B40404>'''Mini-report due'''</font color>]] Mon, May 11 at 10 pm <br>[https://be20109s20.blogspot.com/ Blog post due] Tue, May 12 at 10 pm<br />
|}<br />
</div></div>Prerna Bhargava