Difference between revisions of "Spring 2011:CellFinder"

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(3/14- 3/18 Status Report)
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== 3/14- 3/18 Status Report==
 
== 3/14- 3/18 Status Report==
*This week:
+
===This week===
**tried to find connectors for rectangular capillaries
+
*tried to find connectors for rectangular capillaries
***looks like they don't exist, and it seems like we should be able to detect cells using round capillaries anyways, so we'll try that route first (will be easier to interface with the rest of the instrument)
+
**looks like they don't exist, and it seems like we should be able to detect cells using round capillaries anyways, so we'll try that route first (will be easier to interface with the rest of the instrument)
**built an LED circuit using a voltage regulator.  
+
*built an LED circuit using a voltage regulator.  
**played around with the phototransistor
+
*played around with the phototransistor
***first tried a transimpedance amplifier, but some issues with the op-amp circuit, so we debugged for a while
+
**first tried a transimpedance amplifier, but some issues with the op-amp circuit, so we debugged for a while
***we will try to use the other amplification circuit from the DNA melting lab
+
**we will try to use the other amplification circuit from the DNA melting lab
***it looks like our output from the phototransistor is ~1-10 nA, so we may need quite a lot of gain in our circuit
+
**it looks like our output from the phototransistor is ~1-10 nA, so we may need quite a lot of gain in our circuit
**ordered things from industrial fiberoptics:
+
*ordered things from industrial fiberoptics:
***LED
+
**LED
***phototransistors
+
**phototransistors
***optical fiber
+
**optical fiber
**still need to order:
+
*still need to order:
***epoxy
+
**epoxy
***solenoid valves
+
**solenoid valves
*Next week:
+
===Next week===
**finish circuitry for the phototransistor
+
*finish circuitry for the phototransistor
**start playing around with capillaries/attaching LED and phototransistor to capillaries? (need beads, microscope setup)
+
*start playing around with capillaries/attaching LED and phototransistor to capillaries? (need beads, microscope setup)
**things we will want to answer in the coming weeks:
+
*things we will want to answer in the coming weeks:
***effect of capillary diameter on detection sensitivity?
+
**effect of capillary diameter on detection sensitivity?
***effect of flow rate on sensitivity?
+
**effect of flow rate on sensitivity?
***effect of bead size on sensitivity?  
+
**effect of bead size on sensitivity?  
*Risks and issues:
+
===Risks and issues===
**we have little electronics experience, and Jenn needs an electronics review :)
+
*we have little electronics experience, and Jenn needs an electronics review :)
 
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Revision as of 23:01, 17 March 2011

20.345: Bioinstrumentation Project Lab

3/14- 3/18 Status Report

This week

  • tried to find connectors for rectangular capillaries
    • looks like they don't exist, and it seems like we should be able to detect cells using round capillaries anyways, so we'll try that route first (will be easier to interface with the rest of the instrument)
  • built an LED circuit using a voltage regulator.
  • played around with the phototransistor
    • first tried a transimpedance amplifier, but some issues with the op-amp circuit, so we debugged for a while
    • we will try to use the other amplification circuit from the DNA melting lab
    • it looks like our output from the phototransistor is ~1-10 nA, so we may need quite a lot of gain in our circuit
  • ordered things from industrial fiberoptics:
    • LED
    • phototransistors
    • optical fiber
  • still need to order:
    • epoxy
    • solenoid valves

Next week

  • finish circuitry for the phototransistor
  • start playing around with capillaries/attaching LED and phototransistor to capillaries? (need beads, microscope setup)
  • things we will want to answer in the coming weeks:
    • effect of capillary diameter on detection sensitivity?
    • effect of flow rate on sensitivity?
    • effect of bead size on sensitivity?

Risks and issues

  • we have little electronics experience, and Jenn needs an electronics review :)