Difference between revisions of "Resource list: Optical trapping"
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| + | [[Category:20.309]] | ||
| + | [[Category:Resource list]] | ||
| + | [[Category:Optical Trapping Lab]] | ||
| + | {{Template:20.309}} | ||
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| + | ==Papers== | ||
| + | *Ashkin, et. al. [http://www.physics.princeton.edu/~mcdonald/examples/optics/ashkin_ol_11_288_86.pdf "Observation of a single-beam gradient force optical trap for dielectric particles."] ''Optics Letters'' Vol. 11, No. 5 May 1986 | ||
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| + | *JUSTIN E. MOLLOY and MILES J. PADGET. [http://pdfserve.informaworld.com/266359_731332777_713806734.pdf "Lights, action: optical tweezers."] ''Contemporary Physics'', 2002, volume 43, number 4, pages 241 ± 258 | ||
| + | |||
| + | *Keir C Neuman & Attila Nagy. [http://www.nature.com/nmeth/journal/v5/n6/full/nmeth.1218.html "Single-molecule force spectroscopy: optical tweezers, magnetic tweezers and atomic force microscopy"]. ''Nature Methods'' - 5, 491 - 505 (2008) | ||
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| + | *Appleyard, et. al. [http://scitation.aip.org/getabs/servlet/GetabsServlet?prog=normal&id=AJPIAS000075000001000005000001&idtype=cvips&gifs=yes Optical trapping for undergraduates]. ''[http://scitation.aip.org/ajp/ American Journal of Physics]'' Volume 75, Issue 1 January 2007 | ||
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| + | ==Optical Trap Construction== | ||
| + | |||
| + | * Steven M. Block. [http://www.cshlpress.com/chap_cells.tpl Construction of Optical Tweezers] | ||
| + | |||
| + | ==Procedures and protocols== | ||
| + | |||
| + | [[Image: DNA Tether Protocol.pdf]] | ||
| + | |||
| + | ==Software simulators== | ||
| + | *http://www.physics.gla.ac.uk/Optics/projects/tweezers/trapsimulation/ | ||
| + | *http://phet.colorado.edu/en/simulation/optical-tweezers | ||
| + | *http://glass.phys.uniroma1.it/dileonardo/Applet.php?applet=TrapForcesApplet | ||
| + | |||
==''E. coli'' flagellar motor== | ==''E. coli'' flagellar motor== | ||
| − | [http:// | + | *Richard M. Berry and Howard C. Berg. [http://www.pnas.org/content/94/26/14433.full Absence of a barrier to backwards rotation of the bacterial flagellar motor demonstrated with optical tweezers] PNAS December 23, 1997 vol. 94 no. 26 14433-14437 |
| + | |||
| + | *M. Kara-Ivanova, M. Eisenbacha and S.R. Caplana [http://www.sciencedirect.com/science?_ob=ArticleURL&_udi=B94RW-4V9K7F7-W&_user=501045&_coverDate=07%2F31%2F1995&_rdoc=1&_fmt=high&_orig=search&_sort=d&_docanchor=&view=c&_searchStrId=1384303374&_rerunOrigin=google&_acct=C000022659&_version=1&_urlVersion=0&_userid=501045&md5=3ce79e627763daa73c810a539d6b0313 Fluctuations in rotation rate of the flagellar motor of Escherichia coli] ''Biophysical Journal'', Volume 69, Issue 1, July 1995 | ||
| + | |||
| + | *[http://ecoliwiki.net/colipedia/index.php/cheY CheY] chemotaxis regulator on ''[http://ecoliwiki.net/colipedia/index.php/Welcome_to_EcoliWiki EcoliWiki]''. | ||
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| + | *Neuman, et. al. [http://www.stanford.edu/group/blocklab/Neuman%20et%20al%20BJ%201999.pdf "Characterization of Photodamage to Escherichia coli in Optical Traps."] ''Biophysical Journal'', Volume 77 November 1999 2856–2863 | ||
| + | |||
| + | *S. Tung, J. W. Kim. [http://ieeexplore.ieee.org/stamp/stamp.jsp?arnumber=04547901 "Putting E. coli to Good Use — Using flagellar motors of bacteria to power biological nano devices,"] [http://ieeexplore.ieee.org/xpl/RecentIssue.jsp?punumber=4451717|''IEEE Nanotechnology Magazine''], March 2008 | ||
| + | |||
| + | *Graeme Lowe Markus Meister & Howard C. Berg. [http://www.nature.com/nature/journal/v325/n6105/pdf/325637a0.pdf Rapid rotation of flagellar bundles in swimming bacteria]. Nature 325, 637 - 640 (1987) | doi:10.1038/325637a0 | ||
| + | |||
| + | </div> | ||
Latest revision as of 14:34, 23 August 2013
Papers
- Ashkin, et. al. "Observation of a single-beam gradient force optical trap for dielectric particles." Optics Letters Vol. 11, No. 5 May 1986
- JUSTIN E. MOLLOY and MILES J. PADGET. "Lights, action: optical tweezers." Contemporary Physics, 2002, volume 43, number 4, pages 241 ± 258
- Keir C Neuman & Attila Nagy. "Single-molecule force spectroscopy: optical tweezers, magnetic tweezers and atomic force microscopy". Nature Methods - 5, 491 - 505 (2008)
- Appleyard, et. al. Optical trapping for undergraduates. American Journal of Physics Volume 75, Issue 1 January 2007
Optical Trap Construction
- Steven M. Block. Construction of Optical Tweezers
Procedures and protocols
Software simulators
- http://www.physics.gla.ac.uk/Optics/projects/tweezers/trapsimulation/
- http://phet.colorado.edu/en/simulation/optical-tweezers
- http://glass.phys.uniroma1.it/dileonardo/Applet.php?applet=TrapForcesApplet
E. coli flagellar motor
- Richard M. Berry and Howard C. Berg. Absence of a barrier to backwards rotation of the bacterial flagellar motor demonstrated with optical tweezers PNAS December 23, 1997 vol. 94 no. 26 14433-14437
- M. Kara-Ivanova, M. Eisenbacha and S.R. Caplana Fluctuations in rotation rate of the flagellar motor of Escherichia coli Biophysical Journal, Volume 69, Issue 1, July 1995
- Neuman, et. al. "Characterization of Photodamage to Escherichia coli in Optical Traps." Biophysical Journal, Volume 77 November 1999 2856–2863
- S. Tung, J. W. Kim. "Putting E. coli to Good Use — Using flagellar motors of bacteria to power biological nano devices," IEEE Nanotechnology Magazine, March 2008
- Graeme Lowe Markus Meister & Howard C. Berg. Rapid rotation of flagellar bundles in swimming bacteria. Nature 325, 637 - 640 (1987) | doi:10.1038/325637a0
