Difference between revisions of "20.309 Main Page"
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|style="width: 35%;"|'''Resources''' | |style="width: 35%;"|'''Resources''' | ||
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| − | | Week | + | | rowspan="2"| Week 10: Apr. 9 - 15 |
| − | | | + | | rowspan="2"| Finish up the electronics bootcamp and PSet 3, get started on DNA Melting 1 |
| − | | | + | | rowspan="2"| <font color=#04B45F> Monday Apr. 10th: Electronics Bootcamp |
| + | Friday Apr. 14th: PSet 3</font color> | ||
| [[Electronics Mini-Lab|Electronics bootcamp]] | | [[Electronics Mini-Lab|Electronics bootcamp]] | ||
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* [[Complex Number Review|Complex number review]] | * [[Complex Number Review|Complex number review]] | ||
* [[Input and output impedance]] | * [[Input and output impedance]] | ||
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| − | | | + | | [[DNA Melting Part 1: Measuring Temperature and Fluorescence]] |
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| − | [[DNA Melting Part 1: Measuring Temperature and Fluorescence]] | + | |
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<!-- * [[Real electronics]] --> | <!-- * [[Real electronics]] --> | ||
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| + | | Week 11: Apr. 16 - 22 | ||
| + | | Continue DNA Melting 1 and prep for Quiz 2 | ||
| + | | <font color=#04B45F> Friday Apr. 21st: Quiz 2 in lecture</font color> | ||
| + | | | ||
| + | [[DNA Melting Part 1: Measuring Temperature and Fluorescence]] | ||
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Revision as of 17:44, 9 April 2017
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20.309 This week and next
| Week | Summary | Assignments due | Lab Manual | Resources |
| Week 10: Apr. 9 - 15 | Finish up the electronics bootcamp and PSet 3, get started on DNA Melting 1 | Monday Apr. 10th: Electronics Bootcamp
Friday Apr. 14th: PSet 3 |
Electronics bootcamp | |
| DNA Melting Part 1: Measuring Temperature and Fluorescence |
Overview Code examples and simulations
Reference materials Background reading
| |||
| Week 11: Apr. 16 - 22 | Continue DNA Melting 1 and prep for Quiz 2 | Friday Apr. 21st: Quiz 2 in lecture |
Contents
20.309 course information
Reserve a lab station here: Bioinstrumentation Lab reservation system
Optics bootcamp
Lab manual
Background reading
- Geometrical optics and ray tracing
- Optical detectors, noise, and the limit of detection
- Manta G032 camera measurements
Optical microscopy lab
Code examples and simulations
- Converting Gaussian fit to Rayleigh resolution
- MATLAB: Estimating resolution from a PSF slide image
- Matlab: Scalebars
- Calculating MSD and Diffusion Coefficients
Background reading
- Geometrical optics and ray tracing
- Physical optics and resolution
- Optical aberrations
- Aperture and field stops
- Optical detectors, noise, and the limit of detection
- Manta G032 camera measurements
- Understanding log plots
Electronics bootcamp
Lab manual
Background reading
- Electronics primer
- Khan Academy Material, esp. "Ideal Circuit Elements" and "Voltage Divider"
- Real electronics
- Impedance analysis
- Transfer functions and Bode plots
- Complex number review
- Input and output impedance
DNA melting lab
Lab manuals
- Lab Manual:Measuring DNA Melting Curves
- DNA Melting Part 1: Measuring Temperature and Fluorescence
- DNA Melting Report Requirements for Part 1
- DNA Melting: Model function and parameter estimation by nonlinear regression
- DNA Melting: Simulating DNA Melting - Intermediate Topics
- DNA melting: Identifying the unknown sample
- DNA Melting Part 2: Lock-in Amplifier and Temperature Control
- DNA Melting Report Requirements for Part 2
Code examples and simulations
- DNA Melting: Simulating DNA Melting - Basics
- DNA Melting: Simulating DNA Melting - Intermediate Topics
- DNA Melting: Model function and parameter estimation by nonlinear regression
Reference materials
Background reading
Limits of detection mini-lab
- Lab Manual: Limits of Detection
- Lab Manual: Atomic Force Microscopy (AFM)
- Limits of Detection: Data Sessions
